type: position_score
table:
  filename: ENCFF616AIT.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR038GYF
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR038GYF [TISSUE: Homo sapiens common myeloid progenitor,
    CD34-positive, TARGET: H3K27me3]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: replicated peaks\n\n**audit\\_internal\\\
    _action**: Released analysis {ENCAN999UOW|/analyses/ENCAN999UOW/} has in progress\
    \ subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}\n\
    \n**audit\\_not\\_compliant**: Processed redacted alignments file {ENCFF194ZUF|/files/ENCFF194ZUF/}\
    \ processed by ChIP-seq ENCODE4 v1.7.0 GRCh38 pipeline has 5660635 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K27me3-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})\n\n**audit\\\
    _not\\_compliant**: Processed redacted alignments file {ENCFF054SPC|/files/ENCFF054SPC/}\
    \ processed by ChIP-seq ENCODE4 v1.7.0 GRCh38 pipeline has 8182835 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K27me3-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR038GYF
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive
    replication_type: anisogenic
    biosample_ontology: /biosample-types/primary_cell_CL_0001059/
    perturbed: false
    doi: 10.17989/ENCSR038GYF
    date_created: '2015-09-15T19:49:12.875049+00:00'
    date_released: '2013-07-31'
    submitter_comment: Experiment 5aab3fce-dadd-4c74-8b16-3bbef9fe1ca7 merged into
      base.
    target: H3K27me3
