Resource

Id Histone_ChIP-seq/ENCSR037SNVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR037SNV [biosample_summary="Homo sapiens ovary tissue female adult (30 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR037SNV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000992/
  • biosample_summary: Homo sapiens ovary tissue female adult (30 years)
  • date_created: 2015-09-16T19:17:11.243839+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR037SNV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (30 years)
  • status: released
  • submitter_comment: Several of the old analyses and files on this dataset have been revoked due to processing with a contaminated control. The new analyses and files submitted in Feb 2023 are the corrected version.
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR037SNV float

Histone_ChIP-seq_ENCSR037SNV
Histone_ChIP-seq ENCSR037SNV [biosample_summary="Homo sapiens ovary tissue female adult (30 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR037SNV [1.79, 8.76]
n
7,115,052
mean
4.26
sd
0.974

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 71150520.22% 13539
chr1 608789 0.24% 1184
chr2 427048 0.18% 797
chr3 277939 0.14% 516
chr4 304532 0.16% 536
chr5 379354 0.21% 671
chr6 410615 0.24% 781
chr7 375031 0.24% 661
chr8 264551 0.18% 520
chr9 262136 0.19% 485
chr10 385116 0.29% 680
chr11 310988 0.23% 602
chr12 269751 0.20% 479
chr13 209896 0.18% 334
chr14 185417 0.17% 337
chr15 212316 0.21% 402
chr16 245700 0.27% 473
chr17 393396 0.47% 764
chr18 129775 0.16% 232
chr19 317546 0.54% 648
chr20 322966 0.50% 576
chr21 82832 0.18% 128
chr22 105550 0.21% 213
chrX 633808 0.41% 1520
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 13539 180 6506 525.52 425
global segment-length histogram

Files

Filename Size md5
ENCFF495DAT.bed.gz 266.34 KB 9c9b6022643dcc7a20c58829becc3926
ENCFF495DAT.tabix.bed.gz 135.8 KB 50c52db3ccdc22ed9970ca69f77b6861
ENCFF495DAT.tabix.bed.gz.tbi 67.53 KB 464c8ec51ab8f7df33ffdbedc1f313cf
genomic_resource.yaml 1.9 KB 113511c835e9f341ba4f1526b6a144cc
statistics/