Resource

Id Histone_ChIP-seq/ENCSR036NSKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR036NSK [biosample_summary="Homo sapiens mesendoderm originated from H1" and target="H3K56ac"]
Description
Labels
  • accession: ENCSR036NSK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_NTR_0000856/
  • biosample_summary: Homo sapiens mesendoderm originated from H1
  • date_created: 2015-10-01T07:16:10.398161+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR036NSK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H3K56ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR036NSK float

Histone_ChIP-seq_ENCSR036NSK
Histone_ChIP-seq ENCSR036NSK [biosample_summary="Homo sapiens mesendoderm originated from H1" and target="H3K56ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR036NSK [1.79, 49]
n
54,174,896
mean
9.78
sd
6.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 541748961.68% 118709
chr1 5762937 2.31% 12353
chr2 3783655 1.56% 8619
chr3 3142564 1.58% 6994
chr4 2000539 1.05% 4528
chr5 2691897 1.48% 6079
chr6 2919864 1.71% 6311
chr7 2437152 1.53% 5535
chr8 2212322 1.52% 5077
chr9 2149506 1.55% 4680
chr10 2529436 1.89% 5628
chr11 3114978 2.31% 6741
chr12 2811700 2.11% 6050
chr13 1088555 0.95% 2625
chr14 1837603 1.72% 3897
chr15 1730918 1.70% 3725
chr16 2020807 2.24% 4222
chr17 3124954 3.75% 6341
chr18 1162146 1.45% 2701
chr19 2732219 4.66% 5331
chr20 1572346 2.44% 3451
chr21 531313 1.14% 1198
chr22 1366655 2.69% 2977
chrX 1391938 0.89% 3510
chrY 58892 0.10% 136
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 118709 130 7553 456.37 310
global segment-length histogram

Files

Filename Size md5
ENCFF555TGI.bed.gz 2.47 MB e97c01195e0a50ed8eacac0456f64627
ENCFF555TGI.tabix.bed.gz 1.16 MB f468452524558ee8c6eb4acd07f3eb60
ENCFF555TGI.tabix.bed.gz.tbi 322.62 KB ce7452f8f6fe37edbd2e37c56dd51557
genomic_resource.yaml 1.68 KB ddfe1af02ef0a09bef2e06d3adc32a0c
statistics/