Resource

Id Histone_ChIP-seq/ENCSR036AQXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR036AQX [biosample_summary="Homo sapiens stomach smooth muscle tissue male adult (59 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR036AQX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004222/
  • biosample_summary: Homo sapiens stomach smooth muscle tissue male adult (59 years)
  • date_created: 2015-09-15T19:52:35.694745+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR036AQX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR036AQX float

Histone_ChIP-seq_ENCSR036AQX
Histone_ChIP-seq ENCSR036AQX [biosample_summary="Homo sapiens stomach smooth muscle tissue male adult (59 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR036AQX [1.75, 16.7]
n
13,791,452
mean
4.93
sd
1.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 137914520.43% 28410
chr1 923555 0.37% 1976
chr1_KI270709v1_random 253 0.38% 1
chr2 940167 0.39% 2116
chr2_KI270716v1_random 250 0.16% 1
chr3 678829 0.34% 1554
chr4 736662 0.39% 1609
chr4_GL000008v2_random 3671 1.75% 2
chr5 961229 0.53% 1890
chr6 596907 0.35% 1381
chr7 809944 0.51% 1735
chr8 672132 0.46% 1500
chr9 511296 0.37% 1047
chr10 674842 0.50% 1486
chr11 507888 0.38% 1092
chr12 764612 0.57% 1532
chr13 325226 0.28% 734
chr14 418558 0.39% 906
chr14_GL000225v1_random 6563 3.11% 16
chr14_KI270722v1_random 1829 0.94% 4
chr15 425522 0.42% 821
chr16 573777 0.64% 1144
chr17 314960 0.38% 669
chr17_GL000205v2_random 6310 3.40% 11
chr17_KI270729v1_random 6415 2.28% 14
chr17_KI270730v1_random 4013 3.57% 6
chr18 305272 0.38% 688
chr19 1538085 2.62% 2279
chr20 412039 0.64% 860
chr21 231998 0.50% 458
chr22 251808 0.50% 504
chr22_KI270732v1_random 316 0.76% 1
chr22_KI270735v1_random 1403 3.28% 2
chr22_KI270736v1_random 13115 7.21% 12
chrUn_GL000216v2 4359 2.47% 8
chrUn_GL000219v1 2469 1.38% 5
chrUn_GL000224v1 1382 0.77% 2
chrUn_KI270435v1 294 0.32% 1
chrUn_KI270438v1 4744 4.22% 7
chrUn_KI270442v1 20471 5.22% 33
chrUn_KI270512v1 575 2.53% 1
chrUn_KI270519v1 221 0.16% 1
chrUn_KI270589v1 1832 4.12% 2
chrUn_KI270591v1 666 11.49% 1
chrUn_KI270744v1 2151 1.28% 3
chrUn_KI270751v1 946 0.63% 1
chrUn_KI270757v1 1847 2.59% 4
chrX 112022 0.07% 259
chrY 18027 0.03% 31
3318 contigs with no values (125661641 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 28410 215 26618 485.44 396.5
global segment-length histogram

Files

Filename Size md5
ENCFF745GHW.bed.gz 528.3 KB 1b810304d9fa0df07f192352644bc712
ENCFF745GHW.tabix.bed.gz 276.5 KB 1363175137731c0cd18d1f13a445fcbe
ENCFF745GHW.tabix.bed.gz.tbi 169.2 KB c5dd4b89ce1a5ba2395f7068da398ee2
genomic_resource.yaml 2.02 KB db9c3367e0a23fb442578178520a44f6
statistics/