Resource

Id Histone_ChIP-seq/ENCSR029SIGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR029SIG [biosample_summary="Homo sapiens pancreas tissue female child (16 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR029SIG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female child (16 years)
  • date_created: 2020-05-01T02:25:39.774466+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR029SIG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR029SIG float

Histone_ChIP-seq_ENCSR029SIG
Histone_ChIP-seq ENCSR029SIG [biosample_summary="Homo sapiens pancreas tissue female child (16 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR029SIG [1.51, 64.3]
n
80,142,583
mean
10.6
sd
8.62

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 801425832.49% 54287
chr1 8510704 3.42% 5545
chr2 6101687 2.52% 4172
chr3 4830091 2.44% 3302
chr4 3379363 1.78% 2276
chr5 3756532 2.07% 2633
chr6 4647868 2.72% 3167
chr7 3806178 2.39% 2632
chr8 3343461 2.30% 2277
chr9 3504792 2.53% 2361
chr10 4101412 3.07% 2776
chr11 4185406 3.10% 2756
chr12 4077908 3.06% 2724
chr13 1837722 1.61% 1280
chr14 2829981 2.64% 1810
chr15 2860637 2.80% 1893
chr16 2820338 3.12% 2017
chr17 4263355 5.12% 2767
chr18 1590351 1.98% 1113
chr19 3367431 5.74% 2330
chr20 2066692 3.21% 1441
chr21 945618 2.02% 673
chr22 1905336 3.75% 1206
chrX 1409720 0.90% 1136
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 54287 213 27060 1476.28 1090
global segment-length histogram

Files

Filename Size md5
ENCFF770HCQ.bed.gz 1.33 MB 4a9e8c318828bce8864b1023905ca320
ENCFF770HCQ.tabix.bed.gz 600.28 KB 0eeb47525d3884fd6072fac2c12d7932
ENCFF770HCQ.tabix.bed.gz.tbi 221.17 KB 7e933eb333b25c302f7c7cf6b68e4b0f
genomic_resource.yaml 1.5 KB 779793bd1cf86cd90bf5405600722044
statistics/