Resource

Id Histone_ChIP-seq/ENCSR022LOHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR022LOH [biosample_summary="Homo sapiens cingulate gyrus tissue male adult (81 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR022LOH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002967/
  • biosample_summary: Homo sapiens cingulate gyrus tissue male adult (81 years)
  • date_created: 2015-09-15T19:52:25.931545+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR022LOH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR022LOH float

Histone_ChIP-seq_ENCSR022LOH
Histone_ChIP-seq ENCSR022LOH [biosample_summary="Homo sapiens cingulate gyrus tissue male adult (81 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR022LOH [1.73, 17.1]
n
19,363,088
mean
5.46
sd
2.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 193630880.60% 25483
chr1 1638319 0.66% 2205
chr2 1476707 0.61% 1904
chr3 574657 0.29% 830
chr4 713761 0.38% 849
chr5 1016041 0.56% 1297
chr6 1340728 0.78% 1628
chr7 1056421 0.66% 1248
chr8 879022 0.61% 1272
chr9 713334 0.52% 893
chr10 1237197 0.92% 1655
chr11 944521 0.70% 1318
chr12 1071374 0.80% 1322
chr13 374574 0.33% 507
chr14 753227 0.70% 984
chr15 700774 0.69% 999
chr16 807173 0.89% 1130
chr17 1356653 1.63% 1627
chr18 320498 0.40% 468
chr19 846099 1.44% 1116
chr20 837133 1.30% 1190
chr21 223333 0.48% 316
chr22 372643 0.73% 575
chrX 106393 0.07% 145
chrY 2506 <0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25483 210 17621 759.84 529
global segment-length histogram

Files

Filename Size md5
ENCFF974SWY.bed.gz 487.23 KB 843c2ce7118b916c0a0223af3b7450b4
ENCFF974SWY.tabix.bed.gz 251.71 KB b0f3868c38dcbdd2c5b1554212256b0c
ENCFF974SWY.tabix.bed.gz.tbi 107.19 KB f84a669923d6122b02cf6901fd5fbaab
genomic_resource.yaml 2.01 KB a5910e6c57de1c7a3ede9bd30fcdcb6d
statistics/