Resource

Id Histone_ChIP-seq/ENCSR022FAQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR022FAQ [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR022FAQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)
  • date_created: 2021-01-28T04:10:50.364985+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR022FAQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (78 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR022FAQ float

Histone_ChIP-seq_ENCSR022FAQ
Histone_ChIP-seq ENCSR022FAQ [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR022FAQ [1.72, 53.2]
n
57,290,731
mean
22.2
sd
12.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 572907311.78% 32933
chr1 5504719 2.21% 3100
chr2 4040588 1.67% 2319
chr3 3425633 1.73% 1874
chr4 2440442 1.28% 1390
chr5 2977438 1.64% 1658
chr6 3408045 2.00% 1979
chr7 2797886 1.76% 1727
chr8 2326074 1.60% 1356
chr9 2337370 1.69% 1374
chr10 2527492 1.89% 1454
chr11 3051485 2.26% 1687
chr12 3053332 2.29% 1695
chr13 1392528 1.22% 842
chr14 1836598 1.72% 1047
chr15 1793438 1.76% 1063
chr16 2121744 2.35% 1242
chr17 3027323 3.64% 1700
chr18 1119367 1.39% 671
chr19 3231699 5.51% 1903
chr20 1441832 2.24% 834
chr21 568040 1.22% 356
chr22 1217939 2.40% 708
chrX 1649719 1.06% 954
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 32933 230 32620 1739.61 1296
global segment-length histogram

Files

Filename Size md5
ENCFF180XUG.bed.gz 827.52 KB 5ca7ee797c31bf27d054bec7d5b506d8
ENCFF180XUG.tabix.bed.gz 370.68 KB 89a42fbcec459c645e2c09e3d47313f2
ENCFF180XUG.tabix.bed.gz.tbi 195.26 KB f66cc52761b8883148a15ac7f798c54e
genomic_resource.yaml 1.57 KB 8de5ffb9c7431f90f6ccd0f235f1262e
statistics/