Resource

Id Histone_ChIP-seq/ENCSR021FSYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR021FSY [biosample_summary="Homo sapiens natural killer cell male adult (21 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR021FSY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000623/
  • biosample_summary: Homo sapiens natural killer cell male adult (21 years)
  • date_created: 2015-09-16T21:42:04.537747+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR021FSY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR021FSY float

Histone_ChIP-seq_ENCSR021FSY
Histone_ChIP-seq ENCSR021FSY [biosample_summary="Homo sapiens natural killer cell male adult (21 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR021FSY [1.37, 25.6]
n
25,296,241
mean
6.22
sd
2.56

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 252962410.79% 49814
chr1 1367164 0.55% 2714
chr1_KI270708v1_random 437 0.34% 1
chr1_KI270709v1_random 2894 4.33% 4
chr1_KI270712v1_random 670 0.38% 1
chr2 1905759 0.79% 4014
chr3 1668266 0.84% 3446
chr4 1989127 1.05% 4101
chr4_GL000008v2_random 4382 2.09% 1
chr5 1767146 0.97% 3681
chr5_GL000208v1_random 359 0.39% 1
chr6 1318801 0.77% 2710
chr7 1750653 1.10% 3450
chr8 1335584 0.92% 2738
chr9 788489 0.57% 1589
chr9_KI270720v1_random 206 0.53% 1
chr10 879175 0.66% 1824
chr11 992715 0.73% 2051
chr12 1117184 0.84% 2037
chr13 1029583 0.90% 2128
chr14 740701 0.69% 1558
chr14_GL000009v2_random 305 0.15% 1
chr14_GL000225v1_random 45518 21.55% 63
chr14_KI270722v1_random 4462 2.30% 11
chr14_KI270723v1_random 596 1.56% 1
chr15 572163 0.56% 1036
chr16 786355 0.87% 1363
chr16_KI270728v1_random 1226 0.07% 4
chr17 409558 0.49% 781
chr17_GL000205v2_random 13044 7.03% 25
chr17_KI270729v1_random 14717 5.24% 30
chr17_KI270730v1_random 8913 7.92% 12
chr18 594313 0.74% 1315
chr19 2517310 4.29% 3789
chr20 428594 0.67% 885
chr21 409058 0.88% 814
chr22 183699 0.36% 363
chr22_KI270732v1_random 2857 6.88% 5
chr22_KI270733v1_random 6201 3.45% 10
chr22_KI270735v1_random 3201 7.48% 3
chr22_KI270736v1_random 32467 17.85% 56
chrUn_GL000216v2 16679 9.44% 35
chrUn_GL000219v1 2910 1.62% 6
chrUn_GL000220v1 314 0.19% 1
chrUn_GL000224v1 6523 3.63% 14
chrUn_KI270435v1 837 0.90% 2
chrUn_KI270438v1 7523 6.69% 12
chrUn_KI270442v1 55937 14.27% 71
chrUn_KI270508v1 192 9.84% 1
chrUn_KI270512v1 779 3.43% 2
chrUn_KI270519v1 2116 1.53% 3
chrUn_KI270589v1 2817 6.33% 1
chrUn_KI270591v1 551 9.51% 1
chrUn_KI270744v1 2492 1.48% 5
chrUn_KI270746v1 1929 2.90% 6
chrUn_KI270749v1 1776 1.12% 3
chrUn_KI270750v1 944 0.63% 2
chrUn_KI270751v1 1318 0.87% 2
chrUn_KI270754v1 189 0.47% 1
chrUn_KI270756v1 1219 1.53% 3
chrUn_KI270757v1 1723 2.42% 2
chrX 381978 0.24% 823
chrY 111643 0.20% 201
3304 contigs with no values (122429992 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49814 175 27016 507.81 404
global segment-length histogram

Files

Filename Size md5
ENCFF622WDM.bed.gz 936.66 KB ea427f6a782f9e2e403bf715c36edc5e
ENCFF622WDM.tabix.bed.gz 480.36 KB 0d7d4bf8c1ec10486296b02336689114
ENCFF622WDM.tabix.bed.gz.tbi 236.59 KB 9c8b9d86d9959a55d45d920e29e822c1
genomic_resource.yaml 1.99 KB b9087e198063356528b389128cc97f1f
statistics/