Histone_ChIP-seq_ENCSR019SQX
Histone_ChIP-seq ENCSR019SQX [biosample_summary="Homo sapiens H1" and target="H3K4me3"]
×
| Id: | Histone_ChIP-seq/ENCSR019SQX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR019SQX [biosamplesummary="Homo sapiens H1" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN812EWF|/analyses/ENCAN812EWF/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF255JOI|/files/ENCFF255JOI/} processed by ChIP-seq ENCODE3 hg19 pipeline has 9911004 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF861OUG|/files/ENCFF861OUG/} processed by ChIP-seq ENCODE3 hg19 pipeline has 6106106 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR019SQX | float |
Histone_ChIP-seq_ENCSR019SQX |
Histone_ChIP-seq ENCSR019SQX [biosample_summary="Homo sapiens H1" and target="H3K4me3"]
|
|
[1.51, 65.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF178RTX.bed.gz | 782.9 KB | e63ced422a2f8d896d468a0f80486fa7 |
| ENCFF178RTX.bed.gz.dvc | 100.0 B | 0af8931cf169904bda5b706f812e732c |
| ENCFF178RTX.tabix.bed.gz | 384.21 KB | faff6a6360360ef0ff2b03282cc92fc9 |
| ENCFF178RTX.tabix.bed.gz.dvc | 106.0 B | 8cb3e6ecc39d60c2d2c3484967e05e74 |
| ENCFF178RTX.tabix.bed.gz.tbi | 167.57 KB | 5a59484c66501930555a8bec1e1d75b4 |
| ENCFF178RTX.tabix.bed.gz.tbi.dvc | 110.0 B | 38c0186f4fa194d951cb5074d7ed6d21 |
| genomic_resource.yaml | 2.35 KB | fd238c2a0da8095882394d3693d9f10c |
| genomic_resource_original.yaml | 2.25 KB | 95ec65cb4378bb4038808ccb192cfbf5 |
| statistics/ |