Resource
| Id | Histone_ChIP-seq/ENCSR010OVI |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR010OVI [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"] |
| Description |
status: released biological_replicates: Rep 1 summary: 72 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR010OVI | float |
Histone_ChIP-seq_ENCSR010OVI |
Histone_ChIP-seq ENCSR010OVI [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
|
 |
[1.36, 69.6] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 105816690 | 3.29% | 88408 |
| chr1 | 10071149 | 4.05% | 8340 |
| chr1_KI270713v1_random | 1737 | 4.26% | 3 |
| chr2 | 8026381 | 3.31% | 6831 |
| chr3 | 6482616 | 3.27% | 5485 |
| chr3_GL000221v1_random | 534 | 0.34% | 1 |
| chr4 | 4589777 | 2.41% | 3912 |
| chr5 | 5626527 | 3.10% | 4815 |
| chr6 | 6028749 | 3.53% | 4920 |
| chr7 | 5151850 | 3.23% | 4422 |
| chr8 | 5038172 | 3.47% | 4284 |
| chr9 | 4160160 | 3.01% | 3692 |
| chr9_KI270718v1_random | 509 | 1.34% | 2 |
| chr9_KI270719v1_random | 390 | 0.22% | 1 |
| chr10 | 5101671 | 3.81% | 4244 |
| chr11 | 5149476 | 3.81% | 4186 |
| chr12 | 5568646 | 4.18% | 4622 |
| chr13 | 2336783 | 2.04% | 2068 |
| chr14 | 3378624 | 3.16% | 2704 |
| chr14_GL000009v2_random | 429 | 0.21% | 1 |
| chr14_GL000194v1_random | 3424 | 1.79% | 6 |
| chr14_KI270723v1_random | 707 | 1.85% | 1 |
| chr15 | 3596752 | 3.53% | 2980 |
| chr16 | 3973967 | 4.40% | 3391 |
| chr16_KI270728v1_random | 917 | 0.05% | 1 |
| chr17 | 5434627 | 6.53% | 4273 |
| chr17_GL000205v2_random | 18112 | 9.76% | 5 |
| chr18 | 1936945 | 2.41% | 1678 |
| chr19 | 4783486 | 8.16% | 3718 |
| chr20 | 2986415 | 4.63% | 2429 |
| chr21 | 1384673 | 2.96% | 1128 |
| chr22 | 2103380 | 4.14% | 1805 |
| chr22_KI270731v1_random | 352 | 0.23% | 1 |
| chr22_KI270733v1_random | 3428 | 1.91% | 7 |
| chrUn_GL000195v1 | 3706 | 2.03% | 5 |
| chrUn_GL000219v1 | 5845 | 3.26% | 5 |
| chrUn_GL000220v1 | 265 | 0.16% | 1 |
| chrUn_KI270438v1 | 847 | 0.75% | 3 |
| chrUn_KI270744v1 | 2019 | 1.20% | 2 |
| chrUn_KI270746v1 | 955 | 1.44% | 3 |
| chrUn_KI270753v1 | 1338 | 2.13% | 3 |
| chrUn_KI270755v1 | 553 | 1.51% | 2 |
| chrX | 2858800 | 1.83% | 2426 |
| chrY | 997 | <0.01% | 2 |
| 3323 contigs with no values (124874849 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 88408 | 250 | 30931 | 1196.91 | 683 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF292SZH.bed.gz | 2.0 MB | d713669ea8e7a93287554f77ae7f6b5b |
| ENCFF292SZH.tabix.bed.gz | 934.9 KB | 87c97cb2a3f46f27e32b656689090672 |
| ENCFF292SZH.tabix.bed.gz.tbi | 295.0 KB | 3dc515847ee4fcacf2bef746e57f6b87 |
| genomic_resource.yaml | 3.12 KB | 0d86e5917c146af1de71b92f3e744fc7 |
| statistics/ |