Resource

Id Histone_ChIP-seq/ENCSR004YQDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR004YQD [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR004YQD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)
  • date_created: 2021-04-30T04:18:04.601835+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR004YQD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (87 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR004YQD float

Histone_ChIP-seq_ENCSR004YQD
Histone_ChIP-seq ENCSR004YQD [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR004YQD [1.81, 47.7]
n
87,700,789
mean
8.16
sd
5.14

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 877007892.73% 65213
chr1 8788249 3.53% 6373
chr2 6438000 2.66% 4866
chr3 5397931 2.72% 4075
chr4 3572201 1.88% 2754
chr5 4836013 2.66% 3622
chr6 4651837 2.72% 3498
chr7 3988009 2.50% 3220
chr8 3493274 2.41% 2716
chr9 4234579 3.06% 3028
chr10 4578189 3.42% 3275
chr11 5406380 4.00% 3812
chr12 4508504 3.38% 3449
chr13 2121256 1.85% 1644
chr14 3028756 2.83% 2183
chr15 3049853 2.99% 2236
chr16 2960959 3.28% 2213
chr17 4841785 5.82% 3402
chr18 1707922 2.12% 1344
chr19 3480313 5.94% 2545
chr20 2472946 3.84% 1818
chr21 944559 2.02% 692
chr22 2069940 4.07% 1483
chrX 1129334 0.72% 965
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65213 220 35964 1344.84 911
global segment-length histogram

Files

Filename Size md5
ENCFF311BUM.bed.gz 1.41 MB a911dfc37cdf02a0e0b59147b486af0b
ENCFF311BUM.tabix.bed.gz 686.84 KB 70abf3585acaf46a8728fc2309aa5bf3
ENCFF311BUM.tabix.bed.gz.tbi 220.88 KB b6bb835fa63e6676bcfe1cf8c002f73b
genomic_resource.yaml 1.57 KB 6c3bcac98d8d6b9479113c2e00d168ec
statistics/