Resource

Id Histone_ChIP-seq/ENCSR004HIEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR004HIE [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR004HIE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:30.644850+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR004HIE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR004HIE float

Histone_ChIP-seq_ENCSR004HIE
Histone_ChIP-seq ENCSR004HIE [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR004HIE [1.79, 40.1]
n
103,249,667
mean
7.99
sd
4.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1032496673.21% 71044
chr1 10381675 4.17% 6923
chr2 7605210 3.14% 5346
chr3 6399894 3.23% 4483
chr4 4283019 2.25% 3036
chr5 5644655 3.11% 4029
chr6 5550727 3.25% 3844
chr7 4701214 2.95% 3481
chr8 4180082 2.88% 2990
chr9 4907940 3.55% 3268
chr10 5562745 4.16% 3652
chr11 6258686 4.63% 4126
chr12 5198779 3.90% 3563
chr13 2456171 2.15% 1739
chr14 3534524 3.30% 2436
chr15 3561980 3.49% 2382
chr16 3458320 3.83% 2447
chr17 5717823 6.87% 3739
chr18 2070929 2.58% 1486
chr19 4003353 6.83% 2661
chr20 2913651 4.52% 1968
chr21 1110957 2.38% 787
chr22 2453044 4.83% 1607
chrX 1294289 0.83% 1051
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71044 230 62542 1453.32 982
global segment-length histogram

Files

Filename Size md5
ENCFF610ZPW.bed.gz 1.49 MB 5d1de17b867e677f2cca0209288b5aac
ENCFF610ZPW.tabix.bed.gz 737.15 KB c8eb2d7cee671cae49aff4965235c188
ENCFF610ZPW.tabix.bed.gz.tbi 229.92 KB ac254daf9466e19d1510f2c5e65ddcd5
genomic_resource.yaml 1.61 KB aad651112b9d98908ce91a40bb184cba
statistics/