Resource

Id Histone_ChIP-seq/ENCSR000HPRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000HPR [biosample_summary="Homo sapiens kidney tissue male adult (67 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR000HPR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002113/
  • biosample_summary: Homo sapiens kidney tissue male adult (67 years)
  • date_created: 2015-09-15T19:52:21.316573+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR000HPR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (67 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000HPR float

Histone_ChIP-seq_ENCSR000HPR
Histone_ChIP-seq ENCSR000HPR [biosample_summary="Homo sapiens kidney tissue male adult (67 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR000HPR [1.66, 13.4]
n
5,926,463
mean
4.51
sd
1.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 59264630.18% 17869
chr1 339496 0.14% 1162
chr2 359569 0.15% 1223
chr3 274034 0.14% 928
chr4 350329 0.18% 1151
chr5 450654 0.25% 1383
chr6 235180 0.14% 837
chr7 333063 0.21% 1099
chr8 278058 0.19% 960
chr9 233827 0.17% 681
chr10 262187 0.20% 826
chr11 227727 0.17% 781
chr12 313823 0.24% 908
chr13 133928 0.12% 516
chr14 127092 0.12% 465
chr15 136688 0.13% 395
chr16 252040 0.28% 707
chr17 111146 0.13% 344
chr18 102437 0.13% 368
chr19 1112132 1.90% 2153
chr20 106148 0.16% 357
chr21 80064 0.17% 238
chr22 48958 0.10% 171
chrX 39831 0.03% 154
chrY 18052 0.03% 62
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 17869 160 7494 331.66 261
global segment-length histogram

Files

Filename Size md5
ENCFF727EJL.bed.gz 307.46 KB 9d85b7923a0265ef5e6f24280b7d9924
ENCFF727EJL.tabix.bed.gz 165.53 KB 2d0d1c98e5d13364eee36ea88b3a7480
ENCFF727EJL.tabix.bed.gz.tbi 109.36 KB d84656598ad7fc296cfa4d7f4279fc1a
genomic_resource.yaml 1.48 KB 52e4f1a3bbf3a17408bd3351d732a6b1
statistics/