Histone_ChIP-seq_ENCSR000FCR
Histone_ChIP-seq ENCSR000FCR [biosample_summary="Homo sapiens SK-N-SH" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR000FCR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000FCR [biosamplesummary="Homo sapiens SK-N-SH" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN761IHM|/analyses/ENCAN761IHM/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN761IHM|/analyses/ENCAN761IHM/} has in progress subobject document {2077d6da-7b63-43bd-a90d-9f23e52a2ecd|/documents/2077d6da-7b63-43bd-a90d-9f23e52a2ecd/} audit_not_compliant: Processed alignments file {ENCFF087SLF|/files/ENCFF087SLF/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 32576810 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF632SCR|/files/ENCFF632SCR/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 34264313 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000FCR | float |
Histone_ChIP-seq_ENCSR000FCR |
Histone_ChIP-seq ENCSR000FCR [biosample_summary="Homo sapiens SK-N-SH" and target="H3K4me1"]
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[1.61, 33.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF606SMX.bed.gz | 3.49 MB | 099cb735b01fd3a81962b34e5b0220b6 |
| ENCFF606SMX.bed.gz.dvc | 101.0 B | 5e3b77f59ddc23a8484f87766e27acd3 |
| ENCFF606SMX.tabix.bed.gz | 1.62 MB | cdc9a7919e047628f3f9bdaa89d47384 |
| ENCFF606SMX.tabix.bed.gz.dvc | 107.0 B | 57193b7b8e7de30cb1c71bc17618f069 |
| ENCFF606SMX.tabix.bed.gz.tbi | 389.3 KB | f84457f41b52905a66d897dfc9cfde47 |
| ENCFF606SMX.tabix.bed.gz.tbi.dvc | 110.0 B | 85c605d2e4659a9d3d43ccb1ba740f65 |
| genomic_resource.yaml | 2.61 KB | 9d0cf4cbfa0f7320fde9fe99dbb435be |
| genomic_resource_original.yaml | 2.5 KB | 43189986552f7609dce69f13eb88799e |
| statistics/ |