Histone_ChIP-seq_ENCSR000FCQ
Histone_ChIP-seq ENCSR000FCQ [biosample_summary="Homo sapiens HCT116" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000FCQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000FCQ [biosamplesummary="Homo sapiens HCT116" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN224EAW|/analyses/ENCAN224EAW/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF100UEE|/files/ENCFF100UEE/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 15540069 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF755AFR|/files/ENCFF755AFR/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 29207763 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000FCQ | float |
Histone_ChIP-seq_ENCSR000FCQ |
Histone_ChIP-seq ENCSR000FCQ [biosample_summary="Homo sapiens HCT116" and target="H3K36me3"]
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[1.75, 10.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF528ZNP.bed.gz | 1.9 MB | 9236479266cb58c38dfe6da3bb7566ce |
| ENCFF528ZNP.bed.gz.dvc | 101.0 B | de77184273693c7284db9d8e87dbee4b |
| ENCFF528ZNP.tabix.bed.gz | 966.85 KB | 4b0beaa2146c8b603b1145302963be24 |
| ENCFF528ZNP.tabix.bed.gz.dvc | 106.0 B | d5b932f903d09ca661810468b2aafe2d |
| ENCFF528ZNP.tabix.bed.gz.tbi | 136.35 KB | cfec44167a3e7bcb0ef952a127b90147 |
| ENCFF528ZNP.tabix.bed.gz.tbi.dvc | 110.0 B | 025056bc7da43b224ad037db2578c928 |
| genomic_resource.yaml | 2.44 KB | b083b1792a2effe3a90532cdb708b2dd |
| genomic_resource_original.yaml | 2.33 KB | 32d992839baf794e8012e04b54331f3a |
| statistics/ |