type: position_score
table:
  filename: ENCFF158YTR.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000FCP
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR000FCP [biosample_summary="Homo sapiens HCT116" and target="H3K9me3"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR000FCP [biosample_summary="Homo sapiens HCT116" and target="H3K9me3"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_internal\\\
    _action**: Released analysis {ENCAN829DUI|/analyses/ENCAN829DUI/} has in progress\
    \ subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}\n\
    \n**audit\\_internal\\_action**: Released analysis {ENCAN829DUI|/analyses/ENCAN829DUI/}\
    \ has in progress subobject document {74cb5647-23f1-4e2d-924b-0f9f92f1a038|/documents/74cb5647-23f1-4e2d-924b-0f9f92f1a038/}\n\
    \n**audit\\_warning**: Processed unfiltered alignments file {ENCFF383RZK|/files/ENCFF383RZK/}\
    \ processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 37291408 mapped reads.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K9me3-human and investigated as a broad histone mark is 35 million mapped\
    \ reads. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})\n\n**audit\\\
    _warning**: Processed unfiltered alignments file {ENCFF027DUB|/files/ENCFF027DUB/}\
    \ processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 36320111 mapped reads.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K9me3-human and investigated as a broad histone mark is 35 million mapped\
    \ reads. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000FCP
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens HCT116
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002824/
    perturbed: false
    doi: 10.17989/ENCSR000FCP
    date_created: '2013-10-29T20:05:28.600209+00:00'
    date_released: '2014-07-07'
    submitter_comment: Cross-correlation metrics are too poor to permit further analysis.
    target: H3K9me3
