Histone_ChIP-seq_ENCSR000EXA
Histone_ChIP-seq ENCSR000EXA [biosample_summary="Homo sapiens NT2/D1" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR000EXA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000EXA [biosamplesummary="Homo sapiens NT2/D1" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN783VDM|/analyses/ENCAN783VDM/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF921DJT|/files/ENCFF921DJT/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 14015227 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF425PUW|/files/ENCFF425PUW/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 14889901 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000EXA | float |
Histone_ChIP-seq_ENCSR000EXA |
Histone_ChIP-seq ENCSR000EXA [biosample_summary="Homo sapiens NT2/D1" and target="H3K4me1"]
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[1.68, 14.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF630ZPK.bed.gz | 2.49 MB | e0372662b2048b4aeb9a80ec77744bcb |
| ENCFF630ZPK.bed.gz.dvc | 101.0 B | b659e0090395ee062d73547ea9cbb322 |
| ENCFF630ZPK.tabix.bed.gz | 1.23 MB | 53b2b4c65c99ac9f2d2aa41ea4b1e565 |
| ENCFF630ZPK.tabix.bed.gz.dvc | 107.0 B | fb2cdb58aed95829a9ead1a6131e91aa |
| ENCFF630ZPK.tabix.bed.gz.tbi | 313.75 KB | cb3d4f040b5ff07dcaff647defdf0964 |
| ENCFF630ZPK.tabix.bed.gz.tbi.dvc | 110.0 B | ecbfb6fe1d8ad428255d96e3fe60b24f |
| genomic_resource.yaml | 2.37 KB | 7700e8d96fda5a9cb393979f75b52208 |
| genomic_resource_original.yaml | 2.26 KB | 0b56aa9a63876de381b92681c9e4484e |
| statistics/ |