Histone_ChIP-seq_ENCSR000EUS
Histone_ChIP-seq ENCSR000EUS [biosample_summary="Homo sapiens HCT116" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR000EUS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000EUS [biosamplesummary="Homo sapiens HCT116" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN271KWQ|/analyses/ENCAN271KWQ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF415OTY|/files/ENCFF415OTY/} processed by ChIP-seq ENCODE3 hg19 pipeline has 23317923 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF115MLX|/files/ENCFF115MLX/} processed by ChIP-seq ENCODE3 hg19 pipeline has 22995529 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000EUS | float |
Histone_ChIP-seq_ENCSR000EUS |
Histone_ChIP-seq ENCSR000EUS [biosample_summary="Homo sapiens HCT116" and target="H3K4me1"]
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[1.65, 16.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF214SYH.bed.gz | 1.82 MB | 19bcc23f6ad2fea82b387563f1df7e11 |
| ENCFF214SYH.bed.gz.dvc | 101.0 B | 639fcec3a24ee309bf42b160ee6de0b3 |
| ENCFF214SYH.tabix.bed.gz | 865.94 KB | 3c122fddaa152a77c0d984de94ba76a1 |
| ENCFF214SYH.tabix.bed.gz.dvc | 106.0 B | 95b6d84aec3bdb4544a514fc7ee64b86 |
| ENCFF214SYH.tabix.bed.gz.tbi | 249.54 KB | ec01f1092f08e2866fe64df8d99eea82 |
| ENCFF214SYH.tabix.bed.gz.tbi.dvc | 110.0 B | 687ce94b93114e2a7d53c47569c3bec6 |
| genomic_resource.yaml | 2.37 KB | 4b52c6413539ec287a9dbf3a6d92f04f |
| genomic_resource_original.yaml | 2.26 KB | 2cab6cfac70f00c75b954122cbf692cb |
| statistics/ |