Resource

Id Histone_ChIP-seq/ENCSR000DWMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000DWM [biosample_summary="Homo sapiens CD14-positive monocyte female" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR000DWM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001054/
  • biosample_summary: Homo sapiens CD14-positive monocyte female
  • date_created: 2013-12-12T06:58:28.112099+00:00
  • date_released: 2011-11-17
  • doi: 10.17989/ENCSR000DWM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000DWM float

Histone_ChIP-seq_ENCSR000DWM
Histone_ChIP-seq ENCSR000DWM [biosample_summary="Homo sapiens CD14-positive monocyte female" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR000DWM [1.73, 20.8]
n
26,243,074
mean
5.57
sd
2.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 262430740.82% 50594
chr1 2531755 1.02% 4680
chr2 2002312 0.83% 3580
chr3 1179402 0.59% 2164
chr4 1169662 0.61% 2097
chr5 1630319 0.90% 2963
chr6 1810370 1.06% 3132
chr7 1324821 0.83% 2331
chr8 1319751 0.91% 2441
chr9 1026415 0.74% 2036
chr10 1252226 0.94% 2403
chr11 1274323 0.94% 2495
chr12 1214651 0.91% 2173
chr13 794069 0.69% 1288
chr14 915797 0.86% 1675
chr15 938450 0.92% 1759
chr16 633374 0.70% 1307
chr17 1067274 1.28% 2091
chr18 599893 0.75% 1114
chr19 722167 1.23% 1453
chr20 745110 1.16% 1649
chr21 170932 0.37% 350
chr22 327708 0.64% 712
chrX 1592035 1.02% 4700
chrY 258 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50594 145 11346 518.7 315
global segment-length histogram

Files

Filename Size md5
ENCFF112ABQ.bed.gz 1.01 MB ef29cf55d02ce1a37473f99582ec7479
ENCFF112ABQ.tabix.bed.gz 500.13 KB 1986de0803de5708515086bd2f398e45
ENCFF112ABQ.tabix.bed.gz.tbi 123.65 KB c50ac1fcc5a1ae9502185ff7852663df
genomic_resource.yaml 1.92 KB 46a6d3da0043b5f314f57308902bbb58
statistics/