Histone_ChIP-seq_ENCSR000DVF
Histone_ChIP-seq ENCSR000DVF [biosample_summary="Homo sapiens kidney epithelial cell" and target="H3K27me3"]
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| Id: | Histone_ChIP-seq/ENCSR000DVF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000DVF [biosamplesummary="Homo sapiens kidney epithelial cell" and target="H3K27me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN518GDE|/analyses/ENCAN518GDE/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF062OQW|/files/ENCFF062OQW/} processed by ChIP-seq ENCODE3 hg19 pipeline has 10139339 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF959JAQ|/files/ENCFF959JAQ/} processed by ChIP-seq ENCODE3 hg19 pipeline has 15906256 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000DVF | float |
Histone_ChIP-seq_ENCSR000DVF |
Histone_ChIP-seq ENCSR000DVF [biosample_summary="Homo sapiens kidney epithelial cell" and target="H3K27me3"]
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[1.61, 30.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF532QZH.bed.gz | 1.18 MB | c280edae639ec9ce202cea427d20e0dc |
| ENCFF532QZH.bed.gz.dvc | 101.0 B | b839e8b186a5a8c9c3c3d6f7d542f38a |
| ENCFF532QZH.tabix.bed.gz | 609.13 KB | 39e64430faf7c17621a2090bc4cf1427 |
| ENCFF532QZH.tabix.bed.gz.dvc | 106.0 B | ba9ed8c437bfef895e337a3bf0fdc276 |
| ENCFF532QZH.tabix.bed.gz.tbi | 145.89 KB | 9d8b848656e4bfb1fb9e5c7e6a37e94b |
| ENCFF532QZH.tabix.bed.gz.tbi.dvc | 110.0 B | bfbd1e8325507c42ae60cfbc7b0b0443 |
| genomic_resource.yaml | 2.72 KB | 0bd270129a2a7acfa083b08a802df82c |
| genomic_resource_original.yaml | 2.6 KB | 31b11c8c9943cf3c0d043d7470ad096d |
| statistics/ |