Histone_ChIP-seq_ENCSR000DUD
Histone_ChIP-seq ENCSR000DUD [biosample_summary="Homo sapiens HepG2" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000DUD |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000DUD [biosamplesummary="Homo sapiens HepG2" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN496REV|/analyses/ENCAN496REV/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF130PYS|/files/ENCFF130PYS/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 12673870 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF660VAM|/files/ENCFF660VAM/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 12822435 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000DUD | float |
Histone_ChIP-seq_ENCSR000DUD |
Histone_ChIP-seq ENCSR000DUD [biosample_summary="Homo sapiens HepG2" and target="H3K36me3"]
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[1.8, 12.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF524PMT.bed.gz | 2.61 MB | 40fba3eb33da3f786dca01e156e5a083 |
| ENCFF524PMT.bed.gz.dvc | 101.0 B | 37c07d97c3c67630eacd08e02db3969e |
| ENCFF524PMT.tabix.bed.gz | 1.37 MB | 035c22aa8e0c380cc61326b0723c57d5 |
| ENCFF524PMT.tabix.bed.gz.dvc | 107.0 B | d24c254447ba0d50ffd93f990e7eeaa0 |
| ENCFF524PMT.tabix.bed.gz.tbi | 194.93 KB | 5987ce9bfc0c82a5b9a3db5336e1352d |
| ENCFF524PMT.tabix.bed.gz.tbi.dvc | 110.0 B | 9ca67b398f7365b232fc494c6619a60d |
| genomic_resource.yaml | 2.37 KB | 9d0a906eaf6b7b401ffb40faa8360316 |
| genomic_resource_original.yaml | 2.26 KB | 0a07edeb961c0598600ce3c790150b26 |
| statistics/ |