Resource

Id Histone_ChIP-seq/ENCSR000DTZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000DTZ [biosample_summary="Homo sapiens HeLa-S3 G1b phase" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR000DTZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002791/
  • biosample_summary: Homo sapiens HeLa-S3 G1b phase
  • date_created: 2013-12-12T06:57:39.437486+00:00
  • date_released: 2011-02-11
  • doi: 10.17989/ENCSR000DTZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: G1b phase
  • status: released
  • submitter_comment: Replicate 1,1 of this experiment was previously attributed to biosample ENCBS432ENC and replicate 2,1 of this experiment was previously attributed to biosample ENCBS432ENC but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000DTZ float

Histone_ChIP-seq_ENCSR000DTZ

Histone_ChIP-seq ENCSR000DTZ [biosample_summary="Homo sapiens HeLa-S3 G1b phase" and target="H3K36me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR000DTZ [1.86, 9.09]
n
10,263,572
mean
4.01
sd
0.851

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 102635720.32% 49572
chr1 1163270 0.47% 5637
chr2 427177 0.18% 2203
chr3 647875 0.33% 3208
chr4 97583 0.05% 563
chr5 585666 0.32% 2685
chr6 317989 0.19% 1630
chr7 443273 0.28% 2220
chr8 415063 0.29% 1984
chr9 731552 0.53% 3249
chr10 310529 0.23% 1582
chr11 645523 0.48% 2941
chr12 597670 0.45% 2906
chr13 115384 0.10% 601
chr14 309482 0.29% 1574
chr15 538220 0.53% 2501
chr16 522364 0.58% 2538
chr17 676140 0.81% 3330
chr18 159065 0.20% 824
chr19 569322 0.97% 2701
chr20 426241 0.66% 1896
chr21 163562 0.35% 789
chr22 113938 0.22% 603
chrX 286684 0.18% 1407
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49572 120 1687 207.04 176
global segment-length histogram

Files

Filename Size md5
ENCFF056OVB.bed.gz 866.46 KB a5296d2fc22bac389a6d32afb83c8b80
ENCFF056OVB.tabix.bed.gz 463.93 KB 64f79a7b9cd89b1839e84695c7a7a422
ENCFF056OVB.tabix.bed.gz.tbi 139.03 KB b71857f63ab434eea965848a37f6bd0a
genomic_resource.yaml 2.67 KB 36f0414c8b0d7affe709a86c149abc4a
statistics/