Histone_ChIP-seq_ENCSR000DQU
Histone_ChIP-seq ENCSR000DQU [biosample_summary="Homo sapiens GM06990" and target="H3K27me3"]
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| Id: | Histone_ChIP-seq/ENCSR000DQU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000DQU [biosamplesummary="Homo sapiens GM06990" and target="H3K27me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN957FZJ|/analyses/ENCAN957FZJ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF778KXZ|/files/ENCFF778KXZ/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 9136227 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF458QQR|/files/ENCFF458QQR/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 13687837 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000DQU | float |
Histone_ChIP-seq_ENCSR000DQU |
Histone_ChIP-seq ENCSR000DQU [biosample_summary="Homo sapiens GM06990" and target="H3K27me3"]
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[2.36, 8.74] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF053LMS.bed.gz | 296.12 KB | 8c9cb939845362d29828f61917e7bc2a |
| ENCFF053LMS.bed.gz.dvc | 100.0 B | 742a74c5e02075183b5913f563db5e06 |
| ENCFF053LMS.tabix.bed.gz | 168.94 KB | ef6631d0bbf6f18cb53c05ecb88ed822 |
| ENCFF053LMS.tabix.bed.gz.dvc | 106.0 B | 88cd91174c7f59694a01e4ccee876556 |
| ENCFF053LMS.tabix.bed.gz.tbi | 103.42 KB | 8b1c57aa0ba40579772398876a36c14f |
| ENCFF053LMS.tabix.bed.gz.tbi.dvc | 110.0 B | 0c289e09d5208fa8872cc4f80cb5122f |
| genomic_resource.yaml | 2.68 KB | f5745dba0c0e3f280842fecc0f341f9b |
| genomic_resource_original.yaml | 2.57 KB | 7eeb4d436f4c315ac4e84fe1cc25a7a2 |
| statistics/ |