type: position_score
table:
  filename: ENCFF053LMS.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000DQU
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR000DQU [TISSUE: Homo sapiens GM06990, TARGET: H3K27me3]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: replicated peaks\n\n**audit\\_internal\\\
    _action**: Archived analysis {ENCAN957FZJ|/analyses/ENCAN957FZJ/} has in progress\
    \ subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}\n\
    \n**audit\\_not\\_compliant**: Processed alignments file {ENCFF778KXZ|/files/ENCFF778KXZ/}\
    \ processed by ChIP-seq ENCODE3 GRCh38 pipeline has 9136227 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K27me3-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})\n\n**audit\\\
    _not\\_compliant**: Processed alignments file {ENCFF458QQR|/files/ENCFF458QQR/}\
    \ processed by ChIP-seq ENCODE3 GRCh38 pipeline has 13687837 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K27me3-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000DQU
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens GM06990
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002783/
    perturbed: false
    doi: 10.17989/ENCSR000DQU
    date_created: '2014-02-12T23:06:47.497359+00:00'
    date_released: '2011-02-11'
    submitter_comment: Replicate 2,1 of this experiment was previously attributed
      to biosample ENCBS057ENC and replicate 1,1 of this experiment was previously
      attributed to biosample ENCBS057ENC but they have since been corrected to the
      current biosamples. Please note that the biosample term has remain unchanged.
    target: H3K27me3
