Histone_ChIP-seq_ENCSR000DQT
Histone_ChIP-seq ENCSR000DQT [biosample_summary="Homo sapiens GM06990" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000DQT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000DQT [biosamplesummary="Homo sapiens GM06990" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN557QLD|/analyses/ENCAN557QLD/} has in progress subobject document {30fb284e-e910-467a-94a4-8b97bbcc204a|/documents/30fb284e-e910-467a-94a4-8b97bbcc204a/} audit_internal_action: Released analysis {ENCAN557QLD|/analyses/ENCAN557QLD/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF132QCV|/files/ENCFF132QCV/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 13919524 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF810IOI|/files/ENCFF810IOI/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 13944340 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000DQT | float |
Histone_ChIP-seq_ENCSR000DQT |
Histone_ChIP-seq ENCSR000DQT [biosample_summary="Homo sapiens GM06990" and target="H3K36me3"]
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[2.02, 12.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF884ZOW.bed.gz | 1.78 MB | b730f9e5d29094ccf305d8988ba6996d |
| ENCFF884ZOW.bed.gz.dvc | 101.0 B | 3b1eb253383c557a85e44a4a76d3d55e |
| ENCFF884ZOW.tabix.bed.gz | 972.82 KB | 62ce617add66c185f646af1e53a42446 |
| ENCFF884ZOW.tabix.bed.gz.dvc | 106.0 B | 88a68bddd35df4aa4cba38ec99838ccd |
| ENCFF884ZOW.tabix.bed.gz.tbi | 160.57 KB | 5de6abd6f3a01f9f39c1cedc86e09538 |
| ENCFF884ZOW.tabix.bed.gz.tbi.dvc | 110.0 B | b2c6e7e7c22a0411a738867b11ed7f66 |
| genomic_resource.yaml | 2.92 KB | 64e9093ae1f7dee1e1fc3731316fa5cd |
| genomic_resource_original.yaml | 2.81 KB | e75f422158c84fdd33ede590eb4950d5 |
| statistics/ |