Histone_ChIP-seq_ENCSR000DQK
Histone_ChIP-seq ENCSR000DQK [biosample_summary="Homo sapiens Caco-2" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000DQK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000DQK [biosamplesummary="Homo sapiens Caco-2" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN869USG|/analyses/ENCAN869USG/} has in progress subobject document {6cd25096-02e2-43be-aafa-4869d30fbc99|/documents/6cd25096-02e2-43be-aafa-4869d30fbc99/} audit_internal_action: Released analysis {ENCAN869USG|/analyses/ENCAN869USG/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF788XRD|/files/ENCFF788XRD/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 11686535 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF691XDC|/files/ENCFF691XDC/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 11573700 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000DQK | float |
Histone_ChIP-seq_ENCSR000DQK |
Histone_ChIP-seq ENCSR000DQK [biosample_summary="Homo sapiens Caco-2" and target="H3K36me3"]
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[1.86, 10.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF479TQU.bed.gz | 563.66 KB | c84b20c915299cd52b2f15c9625495e9 |
| ENCFF479TQU.bed.gz.dvc | 100.0 B | fd4299eb4609a8f4cf0ab6fb34706052 |
| ENCFF479TQU.tabix.bed.gz | 300.76 KB | d170909c987cae8598ce78fb4965e88b |
| ENCFF479TQU.tabix.bed.gz.dvc | 106.0 B | cd8d8f4129c8f53628521cdb88ac46d8 |
| ENCFF479TQU.tabix.bed.gz.tbi | 116.23 KB | 3157d4f466922e8cc5f8385b0a7ef874 |
| ENCFF479TQU.tabix.bed.gz.tbi.dvc | 110.0 B | 474b85da173938f581bf1ad8d54fece6 |
| genomic_resource.yaml | 2.91 KB | c905fc6a438856fa25c40e74b26e29bb |
| genomic_resource_original.yaml | 2.8 KB | 1426f88c1c6c4c0209beea01c0f7fffc |
| statistics/ |