Resource

Id Histone_ChIP-seq/ENCSR000DPLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000DPL [biosample_summary="Homo sapiens AG04450" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR000DPL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0006270/
  • biosample_summary: Homo sapiens AG04450
  • date_created: 2014-02-12T23:06:19.130427+00:00
  • date_released: 2012-07-24
  • doi: 10.17989/ENCSR000DPL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000DPL float

Histone_ChIP-seq_ENCSR000DPL

Histone_ChIP-seq ENCSR000DPL [biosample_summary="Homo sapiens AG04450" and target="H3K27ac"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR000DPL [2.14, 123]
n
42,948,944
mean
15.3
sd
14.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 429489441.33% 73442
chr1 4105106 1.65% 6975
chr1_KI270713v1_random 185 0.45% 1
chr2 3464204 1.43% 5943
chr3 2566064 1.29% 4469
chr4 1527340 0.80% 2833
chr5 2305982 1.27% 3874
chr6 2291584 1.34% 3999
chr7 1964073 1.23% 3296
chr8 1760983 1.21% 3126
chr9 1933796 1.40% 3358
chr10 2072798 1.55% 3573
chr11 2455314 1.82% 3990
chr12 2187078 1.64% 3666
chr13 922138 0.81% 1699
chr14 1434146 1.34% 2408
chr14_GL000225v1_random 329 0.16% 1
chr15 1632989 1.60% 2795
chr16 1686453 1.87% 2854
chr17 2445714 2.94% 3822
chr17_GL000205v2_random 868 0.47% 2
chr18 742677 0.92% 1362
chr19 1784065 3.04% 2980
chr20 1208870 1.88% 2119
chr21 496797 1.06% 860
chr22 1069476 2.10% 1783
chrUn_GL000195v1 405 0.22% 1
chrUn_GL000219v1 208 0.12% 1
chrUn_KI270442v1 272 0.07% 1
chrX 854062 0.55% 1589
chrY 34968 0.06% 62
3336 contigs with no values (127885421 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73442 160 10711 584.8 416
global segment-length histogram

Files

Filename Size md5
ENCFF645LAB.bed.gz 1.5 MB 541d768105d3ab04420052f0e3338d9f
ENCFF645LAB.tabix.bed.gz 731.02 KB aebd6b48569d606170f84532898b18fa
ENCFF645LAB.tabix.bed.gz.tbi 253.45 KB 244b074b4b2b825a505396a85dabf62f
genomic_resource.yaml 1.87 KB f20ba3ad38342b804c4a71717be1c4ac
statistics/