Histone_ChIP-seq_ENCSR000ARV
Histone_ChIP-seq ENCSR000ARV [biosample_summary="Homo sapiens fibroblast of dermis" and target="H3K4me1"]
×
| Id: | Histone_ChIP-seq/ENCSR000ARV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ARV [biosamplesummary="Homo sapiens fibroblast of dermis" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN568JMQ|/analyses/ENCAN568JMQ/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN568JMQ|/analyses/ENCAN568JMQ/} has in progress subobject document {fc80c893-49b6-4ed6-9b8f-ca031b560083|/documents/fc80c893-49b6-4ed6-9b8f-ca031b560083/} audit_not_compliant: Processed alignments file {ENCFF364ALT|/files/ENCFF364ALT/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 8057288 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed alignments file {ENCFF358WYW|/files/ENCFF358WYW/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 38105430 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ARV | float |
Histone_ChIP-seq_ENCSR000ARV |
Histone_ChIP-seq ENCSR000ARV [biosample_summary="Homo sapiens fibroblast of dermis" and target="H3K4me1"]
|
|
[1.71, 30.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF468SLZ.bed.gz | 4.16 MB | 06aaae2b20057ab4c547bcd2bb4dc839 |
| ENCFF468SLZ.bed.gz.dvc | 101.0 B | ac4741b9c3ff3698e8336772715c4736 |
| ENCFF468SLZ.tabix.bed.gz | 1.82 MB | 19cfd6e7581546c858337ba4ab53940f |
| ENCFF468SLZ.tabix.bed.gz.dvc | 107.0 B | fb38e76aa34bd63e153376b616cabbd8 |
| ENCFF468SLZ.tabix.bed.gz.tbi | 362.54 KB | 7f51231a2fe90ffc36645ecc4aa7ae64 |
| ENCFF468SLZ.tabix.bed.gz.tbi.dvc | 110.0 B | 648080fc11b8a05e68cd1838ee05b157 |
| genomic_resource.yaml | 2.73 KB | 13818298cab9e6210c5ee806083ed1a2 |
| genomic_resource_original.yaml | 2.61 KB | 0b4df68f96588b7fc09f9bdd890d8603 |
| statistics/ |