Resource

Id Histone_ChIP-seq/ENCSR000ARScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000ARS [biosample_summary="Homo sapiens astrocyte" and target="H3K4me2"]
Description
Labels
  • accession: ENCSR000ARS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000127/
  • biosample_summary: Homo sapiens astrocyte
  • date_created: 2013-11-07T22:15:55.799714+00:00
  • date_released: 2012-03-06
  • doi: 10.17989/ENCSR000ARS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000ARS float

Histone_ChIP-seq_ENCSR000ARS

Histone_ChIP-seq ENCSR000ARS [biosample_summary="Homo sapiens astrocyte" and target="H3K4me2"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR000ARS [1.47, 63.1]
n
121,498,260
mean
14
sd
10.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1214982603.78% 105184
chr1 11268645 4.53% 9421
chr2 9688659 4.00% 8684
chr3 7840413 3.95% 6966
chr4 5777537 3.04% 5394
chr5 6909751 3.81% 6072
chr6 7296011 4.27% 6377
chr7 5873740 3.69% 5286
chr8 5423032 3.74% 5003
chr9 5125538 3.70% 4445
chr10 5859786 4.38% 5165
chr11 6344512 4.70% 5247
chr12 6092248 4.57% 5133
chr13 3147837 2.75% 2952
chr14 3897950 3.64% 3308
chr15 4171171 4.09% 3592
chr16 4006362 4.43% 3334
chr17 5664672 6.80% 4453
chr18 2660738 3.31% 2449
chr19 4324162 7.38% 3173
chr20 3001733 4.66% 2608
chr21 1432950 3.07% 1316
chr22 2327776 4.58% 1866
chrX 3263350 2.09% 2860
chrY 99687 0.17% 80
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 105184 210 27738 1155.1 831
global segment-length histogram

Files

Filename Size md5
ENCFF329MGG.bed.gz 2.8 MB cfb0071ea0dae30e6491d0d72f4b18f9
ENCFF329MGG.tabix.bed.gz 1.16 MB 4fcd7e4ba72149744abcc7e56f602174
ENCFF329MGG.tabix.bed.gz.tbi 379.7 KB 2d8da1586fb6a90c6146414a5425e379
genomic_resource.yaml 1.38 KB a51c58b6355a0e0dc27c8cafac9db52a
statistics/