Resource
| Id | Histone_ChIP-seq/ENCSR000ARS |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR000ARS [biosample_summary="Homo sapiens astrocyte" and target="H3K4me2"] |
| Description |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN558MHV|/analyses/ENCAN558MHV/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ARS | float |
Histone_ChIP-seq_ENCSR000ARS |
Histone_ChIP-seq ENCSR000ARS [biosample_summary="Homo sapiens astrocyte" and target="H3K4me2"]
|
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[1.47, 63.1] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 121498260 | 3.78% | 105184 |
| chr1 | 11268645 | 4.53% | 9421 |
| chr2 | 9688659 | 4.00% | 8684 |
| chr3 | 7840413 | 3.95% | 6966 |
| chr4 | 5777537 | 3.04% | 5394 |
| chr5 | 6909751 | 3.81% | 6072 |
| chr6 | 7296011 | 4.27% | 6377 |
| chr7 | 5873740 | 3.69% | 5286 |
| chr8 | 5423032 | 3.74% | 5003 |
| chr9 | 5125538 | 3.70% | 4445 |
| chr10 | 5859786 | 4.38% | 5165 |
| chr11 | 6344512 | 4.70% | 5247 |
| chr12 | 6092248 | 4.57% | 5133 |
| chr13 | 3147837 | 2.75% | 2952 |
| chr14 | 3897950 | 3.64% | 3308 |
| chr15 | 4171171 | 4.09% | 3592 |
| chr16 | 4006362 | 4.43% | 3334 |
| chr17 | 5664672 | 6.80% | 4453 |
| chr18 | 2660738 | 3.31% | 2449 |
| chr19 | 4324162 | 7.38% | 3173 |
| chr20 | 3001733 | 4.66% | 2608 |
| chr21 | 1432950 | 3.07% | 1316 |
| chr22 | 2327776 | 4.58% | 1866 |
| chrX | 3263350 | 2.09% | 2860 |
| chrY | 99687 | 0.17% | 80 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 105184 | 210 | 27738 | 1155.1 | 831 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF329MGG.bed.gz | 2.8 MB | cfb0071ea0dae30e6491d0d72f4b18f9 |
| ENCFF329MGG.tabix.bed.gz | 1.16 MB | 4fcd7e4ba72149744abcc7e56f602174 |
| ENCFF329MGG.tabix.bed.gz.tbi | 379.7 KB | 2d8da1586fb6a90c6146414a5425e379 |
| genomic_resource.yaml | 1.38 KB | a51c58b6355a0e0dc27c8cafac9db52a |
| statistics/ |
