Histone_ChIP-seq_ENCSR000ARQ
Histone_ChIP-seq ENCSR000ARQ [biosample_summary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H3K9me3"]
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| Id: | Histone_ChIP-seq/ENCSR000ARQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ARQ [biosamplesummary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H3K9me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female child (11 years) male adult (45 years) output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN224QNE|/analyses/ENCAN224QNE/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed unfiltered alignments file {ENCFF628ZAE|/files/ENCFF628ZAE/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 33370978 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed unfiltered alignments file {ENCFF279JVA|/files/ENCFF279JVA/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 43516883 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ARQ | float |
Histone_ChIP-seq_ENCSR000ARQ |
Histone_ChIP-seq ENCSR000ARQ [biosample_summary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H3K9me3"]
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[2.16, 9.23] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF959LWN.bed.gz | 27.74 KB | b85d49ce2b5575e3be65a592bcd82981 |
| ENCFF959LWN.bed.gz.dvc | 99.0 B | 99adf1e44ad5a8431df99870704c1fa1 |
| ENCFF959LWN.tabix.bed.gz | 15.73 KB | bfc27b0cc138a0be7b56519477bdf882 |
| ENCFF959LWN.tabix.bed.gz.dvc | 105.0 B | 39be3cc5ed54a5ec6ac38e5bd2ef9afc |
| ENCFF959LWN.tabix.bed.gz.tbi | 15.03 KB | 9f1a0bb4ab953e647a3ce45ed69954b6 |
| ENCFF959LWN.tabix.bed.gz.tbi.dvc | 109.0 B | c4c12b2c04712adef44355eef7a88ba5 |
| genomic_resource.yaml | 2.6 KB | 9a2129be42cf2ac6a1ba81eb7f8a4cce |
| genomic_resource_original.yaml | 2.44 KB | c24039e053ceb7cc4ded4ad0aff680af |
| statistics/ |