Resource

Id Histone_ChIP-seq/ENCSR000ARPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000ARP [biosample_summary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H2AFZ"]
Description
Labels
  • accession: ENCSR000ARP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0002553/
  • biosample_summary: Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)
  • date_created: 2013-11-07T22:16:03.953233+00:00
  • date_released: 2012-03-06
  • doi: 10.17989/ENCSR000ARP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary: female child (11 years) male adult (45 years)
  • status: released
  • submitter_comment:
  • target: H2AFZ

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000ARP float

Histone_ChIP-seq_ENCSR000ARP
Histone_ChIP-seq ENCSR000ARP [biosample_summary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H2AFZ"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR000ARP [1.88, 28.1]
n
21,101,177
mean
6.07
sd
2.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 211011770.66% 55925
chr1 2055897 0.83% 5399
chr2 1698811 0.70% 4514
chr3 1418314 0.72% 3676
chr4 1205206 0.63% 3173
chr5 1204043 0.66% 3229
chr6 1473065 0.86% 3766
chr7 1016144 0.64% 2759
chr8 947361 0.65% 2535
chr9 816998 0.59% 2177
chr10 914317 0.68% 2436
chr11 992488 0.73% 2635
chr12 1151075 0.86% 3083
chr13 567773 0.50% 1478
chr14 669846 0.63% 1710
chr15 707615 0.69% 1849
chr16 613477 0.68% 1634
chr17 888183 1.07% 2347
chr18 462750 0.58% 1269
chr19 889669 1.52% 2327
chr20 471202 0.73% 1261
chr21 235777 0.50% 665
chr22 327679 0.64% 897
chrX 369900 0.24% 1092
chrY 3587 0.01% 14
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55925 140 2702 377.31 298
global segment-length histogram

Files

Filename Size md5
ENCFF542ZPW.bed.gz 1.13 MB 72bd770031c2e8e8bb48080a5b68297d
ENCFF542ZPW.tabix.bed.gz 580.0 KB a7ed67fd9ce1fe095e51ed07fd7499ab
ENCFF542ZPW.tabix.bed.gz.tbi 241.38 KB 3f7acf923d76488e75147ab2fcc376bc
genomic_resource.yaml 1.63 KB 3930835baf74f8f047d0aea93d53f624
statistics/