Resource

Id Histone_ChIP-seq/ENCSR000ARNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000ARN [biosample_summary="Homo sapiens keratinocyte female" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR000ARN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000312/
  • biosample_summary: Homo sapiens keratinocyte female
  • date_created: 2013-11-07T22:15:58.151083+00:00
  • date_released: 2012-03-06
  • doi: 10.17989/ENCSR000ARN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000ARN float

Histone_ChIP-seq_ENCSR000ARN

Histone_ChIP-seq ENCSR000ARN [biosample_summary="Homo sapiens keratinocyte female" and target="H3K9me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR000ARN [2.03, 19.2]
n
9,183,128
mean
4.23
sd
1.22

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 91831280.29% 30622
chr1 496909 0.20% 1667
chr2 546335 0.23% 1944
chr3 286897 0.14% 988
chr4 403206 0.21% 1327
chr5 464635 0.26% 1553
chr6 283582 0.17% 1003
chr7 641409 0.40% 2181
chr8 531971 0.37% 1839
chr9 231576 0.17% 782
chr10 471184 0.35% 1590
chr11 275983 0.20% 949
chr12 434318 0.33% 1430
chr13 290052 0.25% 1060
chr14 242777 0.23% 889
chr15 384277 0.38% 1165
chr16 355864 0.39% 1222
chr17 185960 0.22% 618
chr18 297050 0.37% 1009
chr19 1140129 1.95% 3328
chr20 181510 0.28% 611
chr21 267451 0.57% 891
chr22 375305 0.74% 1151
chrX 391246 0.25% 1411
chrY 3502 0.01% 14
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30622 138 5250 299.89 243
global segment-length histogram

Files

Filename Size md5
ENCFF403AZM.bed.gz 524.38 KB 01ecb34899ef175d51bf23830a259999
ENCFF403AZM.tabix.bed.gz 289.49 KB 7398e18e6deef0adf8a45ec91d337b07
ENCFF403AZM.tabix.bed.gz.tbi 140.4 KB 64446a8d8123f3ed39076cf52e4f6d15
genomic_resource.yaml 2.6 KB 1b274ef1af41db67f050ce7e407699d5
statistics/