Resource

Id Histone_ChIP-seq/ENCSR000ARLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000ARL [biosample_summary="Homo sapiens keratinocyte female" and target="H2AFZ"]
Description
Labels
  • accession: ENCSR000ARL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000312/
  • biosample_summary: Homo sapiens keratinocyte female
  • date_created: 2013-11-07T22:16:22.181541+00:00
  • date_released: 2012-03-06
  • doi: 10.17989/ENCSR000ARL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female
  • status: released
  • submitter_comment:
  • target: H2AFZ

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000ARL float

Histone_ChIP-seq_ENCSR000ARL
Histone_ChIP-seq ENCSR000ARL [biosample_summary="Homo sapiens keratinocyte female" and target="H2AFZ"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR000ARL [1.91, 26]
n
32,806,969
mean
6.76
sd
3.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 328069691.02% 77999
chr1 3159029 1.27% 7536
chr2 2751215 1.14% 6589
chr3 2182080 1.10% 5054
chr4 1822403 0.96% 4312
chr5 1819156 1.00% 4353
chr6 2314847 1.36% 5325
chr7 1623134 1.02% 3922
chr8 1416145 0.98% 3406
chr9 1346266 0.97% 3231
chr10 1457045 1.09% 3454
chr11 1552590 1.15% 3774
chr12 1808053 1.36% 4272
chr13 965075 0.84% 2299
chr14 1077848 1.01% 2456
chr15 1044399 1.02% 2455
chr16 932214 1.03% 2204
chr17 1287411 1.55% 3016
chr17_GL000205v2_random 2196 1.18% 3
chr18 782040 0.97% 1911
chr19 1191618 2.03% 2700
chr20 789584 1.23% 1955
chr21 382723 0.82% 959
chr22 486410 0.96% 1183
chrUn_GL000195v1 737 0.40% 2
chrUn_GL000219v1 3321 1.85% 7
chrUn_GL000220v1 232 0.14% 1
chrX 609198 0.39% 1620
3339 contigs with no values (185595013 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77999 140 3821 420.61 324
global segment-length histogram

Files

Filename Size md5
ENCFF198OJQ.bed.gz 1.56 MB d932260a9b76e1ce8aeef3286dda1142
ENCFF198OJQ.tabix.bed.gz 802.14 KB 01d3bd6c84b98d12b6788efeec2ccbe0
ENCFF198OJQ.tabix.bed.gz.tbi 301.98 KB 943a76d21c4a5d329cc0463615c39e1b
genomic_resource.yaml 1.4 KB bd2ff08b27849830ddc03629b599ef11
statistics/