Histone_ChIP-seq_ENCSR000ARG
Histone_ChIP-seq ENCSR000ARG [biosample_summary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K9me3"]
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| Id: | Histone_ChIP-seq/ENCSR000ARG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ARG [biosamplesummary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K9me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female adult (50 years) output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN495TVJ|/analyses/ENCAN495TVJ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed unfiltered alignments file {ENCFF749MVD|/files/ENCFF749MVD/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 19419087 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed unfiltered alignments file {ENCFF111NYT|/files/ENCFF111NYT/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 12682819 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ARG | float |
Histone_ChIP-seq_ENCSR000ARG |
Histone_ChIP-seq ENCSR000ARG [biosample_summary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K9me3"]
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[2.07, 19] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF037JZB.bed.gz | 2.02 MB | 57beacd2b7ee76ffe385d6c5f9769265 |
| ENCFF037JZB.bed.gz.dvc | 101.0 B | 0d54a262abc42ac9a9e7c0f540249d8f |
| ENCFF037JZB.tabix.bed.gz | 1.05 MB | 180be12cea0f0b1398109b3f22e77fea |
| ENCFF037JZB.tabix.bed.gz.dvc | 107.0 B | 7367cc2216c91c2a52d9755a4495ffcc |
| ENCFF037JZB.tabix.bed.gz.tbi | 246.33 KB | 789eb26271665e2ccc8fd3acbb178575 |
| ENCFF037JZB.tabix.bed.gz.tbi.dvc | 110.0 B | 39f992a11dff839d60fd8d8478ac3c5a |
| genomic_resource.yaml | 2.5 KB | feb477b4d909993cc07dc739decce545 |
| genomic_resource_original.yaml | 2.35 KB | 2b5bb124c8cbc0753dd43039f137760f |
| statistics/ |