Histone_ChIP-seq_ENCSR000AQX
Histone_ChIP-seq ENCSR000AQX [biosample_summary="Homo sapiens DND-41" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000AQX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AQX [biosamplesummary="Homo sapiens DND-41" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN920SWL|/analyses/ENCAN920SWL/} has in progress subobject document {31de74b1-923d-43b4-a80b-a6c52cb99464|/documents/31de74b1-923d-43b4-a80b-a6c52cb99464/} audit_internal_action: Released analysis {ENCAN920SWL|/analyses/ENCAN920SWL/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF746BJD|/files/ENCFF746BJD/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 28736920 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF973TDF|/files/ENCFF973TDF/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 17441573 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AQX | float |
Histone_ChIP-seq_ENCSR000AQX |
Histone_ChIP-seq ENCSR000AQX [biosample_summary="Homo sapiens DND-41" and target="H3K36me3"]
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[1.65, 34.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF723IHN.bed.gz | 3.63 MB | f134b4b4990fe908f1fabec941b68004 |
| ENCFF723IHN.bed.gz.dvc | 101.0 B | b9f14aeeb8d4d0534afde80a780351ad |
| ENCFF723IHN.tabix.bed.gz | 1.63 MB | 5c1f877d17a09a8543a5f783674591be |
| ENCFF723IHN.tabix.bed.gz.dvc | 107.0 B | 7ee11cab53236e66a75cf133f2cbc20b |
| ENCFF723IHN.tabix.bed.gz.tbi | 153.56 KB | 9a2abd590d8a83104b63eb1ecd95446e |
| ENCFF723IHN.tabix.bed.gz.tbi.dvc | 110.0 B | ac5fe52816f11f480301371b41931c49 |
| genomic_resource.yaml | 2.61 KB | 2b8ff6da01507195dec4347f52b903c0 |
| genomic_resource_original.yaml | 2.5 KB | ff822dbd21eb45b2d6ace0907a4f3c59 |
| statistics/ |