Resource

Id Histone_ChIP-seq/ENCSR000AQPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000AQP [biosample_summary="Homo sapiens astrocyte" and target="H2AFZ"]
Description
Labels
  • accession: ENCSR000AQP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000127/
  • biosample_summary: Homo sapiens astrocyte
  • date_created: 2013-11-07T22:15:57.189075+00:00
  • date_released: 2012-03-06
  • doi: 10.17989/ENCSR000AQP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2AFZ

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000AQP float

Histone_ChIP-seq_ENCSR000AQP
Histone_ChIP-seq ENCSR000AQP [biosample_summary="Homo sapiens astrocyte" and target="H2AFZ"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR000AQP [1.79, 30]
n
41,034,198
mean
7.68
sd
4.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 410341981.28% 70473
chr1 3896342 1.57% 6596
chr2 3309846 1.37% 5780
chr3 2512996 1.27% 4295
chr4 2076565 1.09% 3677
chr5 2256777 1.24% 3970
chr6 2696057 1.58% 4587
chr7 1890395 1.19% 3385
chr8 1825728 1.26% 3211
chr9 1660204 1.20% 2807
chr10 1858606 1.39% 3203
chr11 2125490 1.57% 3604
chr12 2077161 1.56% 3546
chr13 1132682 0.99% 2103
chr14 1345222 1.26% 2194
chr15 1352574 1.33% 2265
chr16 1337079 1.48% 2232
chr17 1889903 2.27% 3110
chr18 922836 1.15% 1685
chr19 1688925 2.88% 2689
chr20 1012387 1.57% 1743
chr21 468294 1.00% 858
chr22 769560 1.51% 1321
chrX 902494 0.58% 1581
chrY 26075 0.05% 31
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70473 160 4917 582.27 453
global segment-length histogram

Files

Filename Size md5
ENCFF314KRH.bed.gz 1.68 MB 760bd85eae9353261b05a34f3acf7727
ENCFF314KRH.tabix.bed.gz 756.44 KB d598e7d178d9490e6859a61a17037221
ENCFF314KRH.tabix.bed.gz.tbi 317.0 KB a6bc9fd248acc7465639c5684a4f2062
genomic_resource.yaml 1.87 KB 5b1425a8586a63797b937d7430ab9848
statistics/