Resource

Id Histone_ChIP-seq/ENCSR000APXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000APX [biosample_summary="Homo sapiens H1" and target="H2AFZ"]
Description
Labels
  • accession: ENCSR000APX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2013-11-07T22:16:23.543697+00:00
  • date_released: 2012-03-06
  • doi: 10.17989/ENCSR000APX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2AFZ

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000APX float

Histone_ChIP-seq_ENCSR000APX
Histone_ChIP-seq ENCSR000APX [biosample_summary="Homo sapiens H1" and target="H2AFZ"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR000APX [1.75, 13.8]
n
53,371,437
mean
4.06
sd
1.06

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 533714371.66% 128690
chr1 4556202 1.83% 10887
chr2 4751065 1.96% 11437
chr3 4063061 2.05% 9800
chr4 4152338 2.18% 10179
chr5 3632422 2.00% 8812
chr6 3812090 2.23% 9044
chr7 2781670 1.75% 6748
chr8 2574666 1.77% 6317
chr9 2065115 1.49% 4951
chr10 2530773 1.89% 6083
chr11 2373106 1.76% 5695
chr12 2682193 2.01% 6384
chr13 2207353 1.93% 5372
chr14 1752538 1.64% 4142
chr15 1522360 1.49% 3558
chr16 1226738 1.36% 2995
chr17 1425300 1.71% 3401
chr18 1560394 1.94% 3832
chr19 939587 1.60% 2288
chr20 1187117 1.84% 2860
chr21 611199 1.31% 1528
chr22 442430 0.87% 1079
chrX 498934 0.32% 1244
chrY 22786 0.04% 54
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 128690 150 2337 414.73 368
global segment-length histogram

Files

Filename Size md5
ENCFF268SLY.bed.gz 2.89 MB 25242fbf16981066d232669f25059d1a
ENCFF268SLY.tabix.bed.gz 1.31 MB 6c099cb54bc665d20ceefba2db1c7ee4
ENCFF268SLY.tabix.bed.gz.tbi 515.01 KB 9c0ee77bf860df3b4b5b2eb9d99d3201
genomic_resource.yaml 1.35 KB d00a73bdd0de1fe9a3c0b04d306f8699
statistics/