Histone_ChIP-seq_ENCSR000APP
Histone_ChIP-seq ENCSR000APP [biosample_summary="Homo sapiens fibroblast of dermis" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000APP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000APP [biosamplesummary="Homo sapiens fibroblast of dermis" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN643HHT|/analyses/ENCAN643HHT/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF008XJN|/files/ENCFF008XJN/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 8471505 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF267JEF|/files/ENCFF267JEF/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 29033687 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000APP | float |
Histone_ChIP-seq_ENCSR000APP |
Histone_ChIP-seq ENCSR000APP [biosample_summary="Homo sapiens fibroblast of dermis" and target="H3K36me3"]
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[1.59, 12.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF806VCD.bed.gz | 1.75 MB | 5e163c75c097cf0a63c5bedbb61946ed |
| ENCFF806VCD.bed.gz.dvc | 101.0 B | 834d1a39e6f784c7b5075170dad8f9a8 |
| ENCFF806VCD.tabix.bed.gz | 881.2 KB | 38583c67f74860b0d93e2ba969099179 |
| ENCFF806VCD.tabix.bed.gz.dvc | 106.0 B | d3486f5c2570f20b6adf91eba33f7609 |
| ENCFF806VCD.tabix.bed.gz.tbi | 172.04 KB | 4e93904eb3e2850a23785428ff498c58 |
| ENCFF806VCD.tabix.bed.gz.tbi.dvc | 110.0 B | b066167cc0ed2a96e1c76b21e11441f4 |
| genomic_resource.yaml | 2.42 KB | b5a6da25d20f3fb1f1ed39fd5fa2a513 |
| genomic_resource_original.yaml | 2.3 KB | cbdccb71db85bb6f4fa7e77a9017dbba |
| statistics/ |