Histone_ChIP-seq_ENCSR000APE
Histone_ChIP-seq ENCSR000APE [biosample_summary="Homo sapiens K562" and target="H3K9me3"]
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| Id: | Histone_ChIP-seq/ENCSR000APE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000APE [biosamplesummary="Homo sapiens K562" and target="H3K9me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN130LOX|/analyses/ENCAN130LOX/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed unfiltered alignments file {ENCFF159LBN|/files/ENCFF159LBN/} processed by ChIP-seq ENCODE3 hg19 pipeline has 18912253 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed unfiltered alignments file {ENCFF516VWS|/files/ENCFF516VWS/} processed by ChIP-seq ENCODE3 hg19 pipeline has 40887276 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000APE | float |
Histone_ChIP-seq_ENCSR000APE |
Histone_ChIP-seq ENCSR000APE [biosample_summary="Homo sapiens K562" and target="H3K9me3"]
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[1.58, 11.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF894VEM.bed.gz | 111.8 KB | fbb04246fcb4ebaf8eaf9109ca5b237d |
| ENCFF894VEM.bed.gz.dvc | 100.0 B | fb8b9a61eb86540dad3895089c89d929 |
| ENCFF894VEM.tabix.bed.gz | 59.9 KB | 2bbf17a1df372cc396a6759b1cafb21d |
| ENCFF894VEM.tabix.bed.gz.dvc | 105.0 B | 17c7dcab04fcf122d013c4ad2e619303 |
| ENCFF894VEM.tabix.bed.gz.tbi | 44.55 KB | 2f1e80c8238245fea15b9a62e71e2bd2 |
| ENCFF894VEM.tabix.bed.gz.tbi.dvc | 109.0 B | a871e737e4d25101b302eb5ceaa14ce4 |
| genomic_resource.yaml | 2.35 KB | 08ddea87d1e3afd1dc5a45df96d26861 |
| genomic_resource_original.yaml | 2.25 KB | 5f377d004bd2d0b9495a3435ca6b2cf0 |
| statistics/ |