Histone_ChIP-seq_ENCSR000AOT
Histone_ChIP-seq ENCSR000AOT [biosample_summary="Homo sapiens astrocyte" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR000AOT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AOT [biosamplesummary="Homo sapiens astrocyte" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN671ODI|/analyses/ENCAN671ODI/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF952AKQ|/files/ENCFF952AKQ/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 9983246 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF040HUE|/files/ENCFF040HUE/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 11041896 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AOT | float |
Histone_ChIP-seq_ENCSR000AOT |
Histone_ChIP-seq ENCSR000AOT [biosample_summary="Homo sapiens astrocyte" and target="H3K4me1"]
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[2.05, 19.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF388GVC.bed.gz | 2.97 MB | 9ddcd305cff466c9f0e7acc75524a688 |
| ENCFF388GVC.bed.gz.dvc | 101.0 B | 652c798e85e7c467fe361fe832af4faa |
| ENCFF388GVC.tabix.bed.gz | 1.34 MB | fb5045bde83c63f41c82e1d71c3db197 |
| ENCFF388GVC.tabix.bed.gz.dvc | 107.0 B | a287a0703758240a2098181639df542a |
| ENCFF388GVC.tabix.bed.gz.tbi | 370.82 KB | 7c436d10afc04b113402f4f69ac33b06 |
| ENCFF388GVC.tabix.bed.gz.tbi.dvc | 110.0 B | 8caf1d5e97a25d1b1cf276bd5ace340d |
| genomic_resource.yaml | 2.38 KB | 13b5f40e7d98f76c3c24c0bfc5855c51 |
| genomic_resource_original.yaml | 2.27 KB | 57d540960d522952e4db2f91fa74bc4f |
| statistics/ |