Resource

Id Histone_ChIP-seq/ENCSR000AOQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000AOQ [biosample_summary="Homo sapiens astrocyte" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR000AOQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000127/
  • biosample_summary: Homo sapiens astrocyte
  • date_created: 2013-11-07T22:16:08.505152+00:00
  • date_released: 2011-02-10
  • doi: 10.17989/ENCSR000AOQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000AOQ float

Histone_ChIP-seq_ENCSR000AOQ
Histone_ChIP-seq ENCSR000AOQ [biosample_summary="Homo sapiens astrocyte" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR000AOQ [2.18, 98.6]
n
73,864,477
mean
16.5
sd
12.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 738644772.30% 72392
chr1 6623753 2.66% 6530
chr2 6019448 2.49% 6015
chr3 5187161 2.62% 4937
chr4 3812772 2.00% 3792
chr5 4730180 2.61% 4352
chr6 4537053 2.66% 4339
chr7 3689579 2.32% 3644
chr8 3346615 2.31% 3337
chr9 3028164 2.19% 2966
chr10 3613208 2.70% 3532
chr11 3834849 2.84% 3588
chr12 3874201 2.91% 3659
chr13 2042072 1.79% 2040
chr14 2286286 2.14% 2222
chr15 2474953 2.43% 2366
chr16 2157044 2.39% 2300
chr17 3138166 3.77% 3018
chr18 1611954 2.01% 1616
chr19 2067949 3.53% 2182
chr20 1698538 2.64% 1675
chr21 948050 2.03% 886
chr22 1317904 2.59% 1239
chrX 1756710 1.13% 2090
chrY 67868 0.12% 67
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 72392 178 16737 1020.34 674
global segment-length histogram

Files

Filename Size md5
ENCFF138TME.bed.gz 1.86 MB ca601df322d63ea3c1d2b560a1d5dbc4
ENCFF138TME.tabix.bed.gz 807.35 KB b83aa2131d9d2607ad5c3310b3813bbf
ENCFF138TME.tabix.bed.gz.tbi 269.62 KB 158a4302999de7acab279952d75d3463
genomic_resource.yaml 2.61 KB e555f9de5ae4b03731099dea28c70384
statistics/