Resource

Id Histone_ChIP-seq/ENCSR000AOMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR000AOM [biosample_summary="Homo sapiens HepG2" and target="H3K79me2"]
Description
Labels
  • accession: ENCSR000AOM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001187/
  • biosample_summary: Homo sapiens HepG2
  • date_created: 2013-11-07T22:15:56.653162+00:00
  • date_released: 2011-02-10
  • doi: 10.17989/ENCSR000AOM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: As of February 9th, 2017, the control has been changed to ENCSR055XHN, requiring new peaks and signal files.
  • target: H3K79me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR000AOM float

Histone_ChIP-seq_ENCSR000AOM

Histone_ChIP-seq ENCSR000AOM [biosample_summary="Homo sapiens HepG2" and target="H3K79me2"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR000AOM [1.84, 33.3]
n
80,289,046
mean
9.38
sd
4.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 802890462.50% 95726
chr1 7288866 2.93% 9084
chr2 7714312 3.19% 8209
chr3 5868440 2.96% 6786
chr4 3113931 1.64% 3750
chr5 3714191 2.05% 4392
chr6 4808254 2.82% 5447
chr7 4008419 2.52% 5031
chr8 3626717 2.50% 4227
chr9 3296225 2.38% 4145
chr10 3774735 2.82% 4619
chr11 3449317 2.55% 4419
chr12 3604963 2.70% 4526
chr13 2387989 2.09% 2604
chr14 2566413 2.40% 3271
chr15 2504916 2.46% 3113
chr16 3477646 3.85% 4016
chr17 4072507 4.89% 5164
chr18 1543918 1.92% 1771
chr19 2616384 4.46% 3326
chr20 2648007 4.11% 2815
chr21 846590 1.81% 905
chr22 1738608 3.42% 2132
chrX 1553932 1.00% 1910
chrY 63766 0.11% 64
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 95726 120 19816 838.74 501
global segment-length histogram

Files

Filename Size md5
ENCFF675FQI.bed.gz 2.02 MB f0dae9fa65ae7623828a0456c6b289c8
ENCFF675FQI.tabix.bed.gz 962.55 KB 685383fa391b2f63cb82791d1a2f2248
ENCFF675FQI.tabix.bed.gz.tbi 124.99 KB 781b13435766303f7ddfb5fba0505f4b
genomic_resource.yaml 1.98 KB e477e51817e3b446b81ed2d9e9e60a9a
statistics/