Histone_ChIP-seq_ENCSR000ANI
Histone_ChIP-seq ENCSR000ANI [biosample_summary="Homo sapiens skeletal muscle myoblast male adult (22 years)" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR000ANI |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ANI [biosamplesummary="Homo sapiens skeletal muscle myoblast male adult (22 years)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: male adult (22 years) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN179YMN|/analyses/ENCAN179YMN/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN179YMN|/analyses/ENCAN179YMN/} has in progress subobject document {eafeeb1d-abcc-43d3-b7f3-632c66116947|/documents/eafeeb1d-abcc-43d3-b7f3-632c66116947/} audit_not_compliant: Processed alignments file {ENCFF699IAQ|/files/ENCFF699IAQ/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 8180393 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF483ONW|/files/ENCFF483ONW/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 7840402 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ANI | float |
Histone_ChIP-seq_ENCSR000ANI |
Histone_ChIP-seq ENCSR000ANI [biosample_summary="Homo sapiens skeletal muscle myoblast male adult (22 years)" and target="H3K4me1"]
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[1.87, 19.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF045PLQ.bed.gz | 2.17 MB | abeda1b134efc2ddc29e0761bc7a1933 |
| ENCFF045PLQ.bed.gz.dvc | 101.0 B | 9e78ec05a98407d3f14859469c1bcb70 |
| ENCFF045PLQ.tabix.bed.gz | 1.04 MB | d01cb1cd8c7df8fc741a5d624acc173a |
| ENCFF045PLQ.tabix.bed.gz.dvc | 107.0 B | 04054db1bc399de33ffe7dbe8bbc34d7 |
| ENCFF045PLQ.tabix.bed.gz.tbi | 308.09 KB | 10c2fc6fcdd2c327db29acd7c5984ed1 |
| ENCFF045PLQ.tabix.bed.gz.tbi.dvc | 110.0 B | a843f1d7b6f71ae180bc26b1caa530d5 |
| genomic_resource.yaml | 2.71 KB | 9229863408d33638d8d61a4e81974c58 |
| genomic_resource_original.yaml | 2.57 KB | adba940dcffc3f53dda17e12ad90b361 |
| statistics/ |