Histone_ChIP-seq_ENCSR000ANA
Histone_ChIP-seq ENCSR000ANA [biosample_summary="Homo sapiens H1" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR000ANA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ANA [biosamplesummary="Homo sapiens H1" and target="H3K4me1"] |
| Description: |
status: archived biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN041PGB|/analyses/ENCAN041PGB/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF111BKP|/files/ENCFF111BKP/} processed by ChIP-seq ENCODE3 hg19 pipeline has 7358637 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF594OXW|/files/ENCFF594OXW/} processed by ChIP-seq ENCODE3 hg19 pipeline has 14570394 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ANA | float |
Histone_ChIP-seq_ENCSR000ANA |
Histone_ChIP-seq ENCSR000ANA [biosample_summary="Homo sapiens H1" and target="H3K4me1"]
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[1.78, 18.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF173MJD.bed.gz | 2.86 MB | 00280e083ce4b85ce884ce240c94e3a7 |
| ENCFF173MJD.bed.gz.dvc | 101.0 B | e2176c1ed115773f19da593b45f7baac |
| ENCFF173MJD.tabix.bed.gz | 1.35 MB | 7dd0f32040ce68c12949e4ca651c2855 |
| ENCFF173MJD.tabix.bed.gz.dvc | 107.0 B | fce62b5deb371c66ee896a7f3899a4d7 |
| ENCFF173MJD.tabix.bed.gz.tbi | 413.79 KB | 85cfdc236b6883c780d1f80af5b57068 |
| ENCFF173MJD.tabix.bed.gz.tbi.dvc | 110.0 B | a0a3b4e731146c4bbf0a4d668a297896 |
| genomic_resource.yaml | 2.35 KB | 5ee68ed91e1ceb94df47b9945a1ca201 |
| genomic_resource_original.yaml | 2.25 KB | 6bfc4ee17a86b231f30277d80b4a7285 |
| statistics/ |