| Id: | Histone_ChIP-seq/ENCSR000AMY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AMY [biosamplesummary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H4K20me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: male adult (45 years) female child (11 years) output_type: replicated peaks audit_error: Processed alignments file {ENCFF866OZT|/files/ENCFF866OZT/} processed by ChIP-seq ENCODE3 hg19 pipeline has 2704077 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H4K20me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_internal_action: Archived analysis {ENCAN008JZG|/analyses/ENCAN008JZG/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF484YTX|/files/ENCFF484YTX/} processed by ChIP-seq ENCODE3 hg19 pipeline has 5980287 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H4K20me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AMY | float |
Histone_ChIP-seq_ENCSR000AMY |
Histone_ChIP-seq ENCSR000AMY [biosample_summary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H4K20me1"]
|
 |
[2.02, 12.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF816HLJ.bed.gz | 297.42 KB | fdcf8ee96892bb57f4cd7950d6e68dd5 |
| ENCFF816HLJ.bed.gz.dvc | 100.0 B | 59b3190fedbc16c469da2a65b8aeddbb |
| ENCFF816HLJ.tabix.bed.gz | 161.16 KB | a67a883404ed296c4410a66316233a73 |
| ENCFF816HLJ.tabix.bed.gz.dvc | 106.0 B | 368c30c799b712728e514598327a18e5 |
| ENCFF816HLJ.tabix.bed.gz.tbi | 125.23 KB | ddb1101e5ac265aa1f04c79fdaaa612d |
| ENCFF816HLJ.tabix.bed.gz.tbi.dvc | 110.0 B | 19a903460413112f9234e98985800294 |
| genomic_resource.yaml | 2.59 KB | b9acfac7a9c35423d667b3630ae5d965 |
| genomic_resource_original.yaml | 2.43 KB | 1080f1faa2727b212a32df146308dfae |
| statistics/ |