Histone_ChIP-seq_ENCSR000AMW
Histone_ChIP-seq ENCSR000AMW [biosample_summary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR000AMW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AMW [biosamplesummary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: male adult (45 years) female child (11 years) output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN761KVA|/analyses/ENCAN761KVA/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF953WAZ|/files/ENCFF953WAZ/} processed by ChIP-seq ENCODE3 hg19 pipeline has 8478028 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed alignments file {ENCFF593NSI|/files/ENCFF593NSI/} processed by ChIP-seq ENCODE3 hg19 pipeline has 15645753 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AMW | float |
Histone_ChIP-seq_ENCSR000AMW |
Histone_ChIP-seq ENCSR000AMW [biosample_summary="Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years)" and target="H3K4me3"]
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[1.93, 41] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF792NWH.bed.gz | 745.47 KB | eacdfe342357ba46a43016458b81a740 |
| ENCFF792NWH.bed.gz.dvc | 100.0 B | 25aa87c2b541ebd0b7a4811fc77ca00e |
| ENCFF792NWH.tabix.bed.gz | 350.95 KB | a0f9cf0c10a450bd9783c654f5c57f81 |
| ENCFF792NWH.tabix.bed.gz.dvc | 106.0 B | d6f85e63d390d78891df8962b69b21a6 |
| ENCFF792NWH.tabix.bed.gz.tbi | 149.58 KB | 49d917a17e872cb5cd08d6482bc42918 |
| ENCFF792NWH.tabix.bed.gz.tbi.dvc | 110.0 B | 9a893832787e8449b24e2d1b06c6bd73 |
| genomic_resource.yaml | 2.59 KB | 5a865af9ddca12e51e2ea672fed27f69 |
| genomic_resource_original.yaml | 2.43 KB | 02b603df33bd9df131670384e8b2946b |
| statistics/ |