Histone_ChIP-seq_ENCSR000AMP
Histone_ChIP-seq ENCSR000AMP [biosample_summary="Homo sapiens HepG2" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR000AMP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AMP [biosamplesummary="Homo sapiens HepG2" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN126JVC|/analyses/ENCAN126JVC/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF959HGH|/files/ENCFF959HGH/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 7231889 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF730FGK|/files/ENCFF730FGK/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 7830876 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AMP | float |
Histone_ChIP-seq_ENCSR000AMP |
Histone_ChIP-seq ENCSR000AMP [biosample_summary="Homo sapiens HepG2" and target="H3K4me3"]
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[2.3, 83] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF497CNS.bed.gz | 1.18 MB | 164814c8dafefffb6d6588e82cfe68a4 |
| ENCFF497CNS.bed.gz.dvc | 101.0 B | ad504095e4059c8aee5cca4ffd2304fe |
| ENCFF497CNS.tabix.bed.gz | 519.91 KB | b597756f3d2df83aefeda6232edb8e0f |
| ENCFF497CNS.tabix.bed.gz.dvc | 106.0 B | b6b30dfa4d7d869729684bcc8f72cdf5 |
| ENCFF497CNS.tabix.bed.gz.tbi | 199.44 KB | fc354c6b268b61743955e1d0a09b63a2 |
| ENCFF497CNS.tabix.bed.gz.tbi.dvc | 110.0 B | 774673147ff43e81b48dc91411751489 |
| genomic_resource.yaml | 2.48 KB | a542f44eb02c51f2ce176dd0dcc6ae75 |
| genomic_resource_original.yaml | 2.37 KB | 5c2825723861aaa4c48a0f22e25f3030 |
| statistics/ |