type: position_score
table:
  filename: ENCFF886SZT.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000AMO
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR000AMO [biosample_summary="Homo sapiens HepG2" and target="H3K27ac"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR000AMO [biosample_summary="Homo sapiens HepG2" and target="H3K27ac"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: replicated peaks\n\n**audit\\_error**: Processed\
    \ alignments file {ENCFF805KGN|/files/ENCFF805KGN/} processed by ChIP-seq ENCODE3\
    \ GRCh38 pipeline has 4754166 usable fragments. The minimum ENCODE standard for\
    \ each replicate in a ChIP-seq experiment targeting H3K27ac-human and investigated\
    \ as a narrow histone mark is 10 million usable fragments. The recommended value\
    \ is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data\
    \ standards|/data-standards/chip-seq/})\n\n**audit\\_internal\\_action**: Archived\
    \ analysis {ENCAN124PYZ|/analyses/ENCAN124PYZ/} has in progress subobject quality\
    \ standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}\n\n\
    **audit\\_not\\_compliant**: Processed alignments file {ENCFF686HFQ|/files/ENCFF686HFQ/}\
    \ processed by ChIP-seq ENCODE3 GRCh38 pipeline has 6641517 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K27ac-human and investigated as a narrow histone mark is 10 million usable\
    \ fragments. The recommended value is > 20 million, but > 10 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000AMO
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens HepG2
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0001187/
    perturbed: false
    doi: 10.17989/ENCSR000AMO
    date_created: '2013-11-07T22:16:00.676073+00:00'
    date_released: '2011-02-10'
    submitter_comment: As of February 9th, 2017, the control has been changed to ENCSR055XHN,
      requiring new peaks and signal files.
    target: H3K27ac
