Histone_ChIP-seq_ENCSR000AML
Histone_ChIP-seq ENCSR000AML [biosample_summary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR000AML |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AML [biosamplesummary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female adult (50 years) output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN059CTT|/analyses/ENCAN059CTT/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF095KBB|/files/ENCFF095KBB/} processed by ChIP-seq ENCODE3 hg19 pipeline has 7892721 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed alignments file {ENCFF037RFR|/files/ENCFF037RFR/} processed by ChIP-seq ENCODE3 hg19 pipeline has 12047668 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AML | float |
Histone_ChIP-seq_ENCSR000AML |
Histone_ChIP-seq ENCSR000AML [biosample_summary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K4me3"]
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[2.07, 89.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF274LUW.bed.gz | 865.63 KB | 0a35c217c7ad1fee21a9d13aba835b47 |
| ENCFF274LUW.bed.gz.dvc | 100.0 B | e70a5bde5d57e094992c9371b50c83ed |
| ENCFF274LUW.tabix.bed.gz | 367.3 KB | 950c8385d43b0ad9a83ca9078c79ebfb |
| ENCFF274LUW.tabix.bed.gz.dvc | 106.0 B | cb16b5d1c59e87d92e99946bfc9a635b |
| ENCFF274LUW.tabix.bed.gz.tbi | 165.79 KB | 7b0a0fa5353e2658635b5fcb7dc083c2 |
| ENCFF274LUW.tabix.bed.gz.tbi.dvc | 110.0 B | 573e8e560e69f3113a2667f619313895 |
| genomic_resource.yaml | 2.48 KB | 888233a851572940643ef9c3d236347b |
| genomic_resource_original.yaml | 2.33 KB | 5482fc4467b93a3d06ad6da4d212bd27 |
| statistics/ |