Histone_ChIP-seq_ENCSR000AMG
Histone_ChIP-seq ENCSR000AMG [biosample_summary="Homo sapiens H1" and target="H3K4me3"]
×
| Id: | Histone_ChIP-seq/ENCSR000AMG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AMG [biosamplesummary="Homo sapiens H1" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN448GJU|/analyses/ENCAN448GJU/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF278YYI|/files/ENCFF278YYI/} processed by ChIP-seq ENCODE4 v1.8.1 GRCh38 pipeline has 5651759 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed alignments file {ENCFF285FHP|/files/ENCFF285FHP/} processed by ChIP-seq ENCODE4 v1.8.1 GRCh38 pipeline has 11015713 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AMG | float |
Histone_ChIP-seq_ENCSR000AMG |
Histone_ChIP-seq ENCSR000AMG [biosample_summary="Homo sapiens H1" and target="H3K4me3"]
|
|
[2.4, 48.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF118FXI.bed.gz | 869.63 KB | 7f283a55ec616de04266849f5b041b7b |
| ENCFF118FXI.bed.gz.dvc | 100.0 B | cafd5256c93427fe50b3bd832fa35cd5 |
| ENCFF118FXI.tabix.bed.gz | 367.28 KB | 5ec62ef71ea4f81e00e37938b52448f1 |
| ENCFF118FXI.tabix.bed.gz.dvc | 106.0 B | 0e4e2409ac7382928422f53b17a02d35 |
| ENCFF118FXI.tabix.bed.gz.tbi | 161.79 KB | 56344079d0771aaa75db8ebbbbea380a |
| ENCFF118FXI.tabix.bed.gz.tbi.dvc | 110.0 B | 73f680232b3c158f2a768ccf5da3ee73 |
| genomic_resource.yaml | 2.37 KB | 5964658ab4e353129c587fc6cd3e24c5 |
| genomic_resource_original.yaml | 2.27 KB | f3b2a24ea7981fdc4412480c0d34103c |
| statistics/ |